Project ID: plumID:20.009
Name: The dynamics of linear polyubiquitin
Archive: https://zenodo.org/record/3878218/files/polyubiquitin_files.zip
Category: bio
Keywords: saxs, martini, metainference, metadynamics, ubiquitin, protein dynamics
PLUMED version: 2.6
Contributor: Carlo Camilloni
Submitted on: 14 Apr 2020
Last revised: 15 Oct 2020
Publication: A. Jussupow, A. C. Messias, R. Stehle, A. Geerlof, S. M. Ø. Solbak, C. Paissoni, A. Bach, M. Sattler, C. Camilloni, The dynamics of linear polyubiquitin. Science Advances. 6 (2020)
PLUMED input files
| File | Compatible with |
|---|---|
| Ub2/plumed-cv.dat |   |
| Ub3/plumed-cv.dat | |
| Ub4/plumed-cv.dat | |
Last tested: 20 Feb 2025, 20:37:10
Project description and instructions
this is a metadynamic metainference Martini calculation using SAXS. Simulations are performed with gromacs 2016 or newer
Submission history
[v1] 14 Apr 2020: original submission
[v2] 15 Oct 2020: updated doi
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