Project ID: plumID:20.009
Name: The dynamics of linear polyubiquitin
Archive: https://zenodo.org/record/3878218/files/polyubiquitin_files.zip
Category: bio
Keywords: saxs, martini, metainference, metadynamics, ubiquitin, protein dynamics
PLUMED version: 2.6
Contributor: Carlo Camilloni
Submitted on: 14 Apr 2020
Last revised: 15 Oct 2020
Publication: A. Jussupow et al., The dynamics of linear polyubiquitin, Science Advances 6, eabc3786 (2020)

PLUMED input files

File Compatible with
Ub2/plumed-cv.dat tested on v2.6 tested on master
Ub3/plumed-cv.dat tested on v2.6 tested on master
Ub4/plumed-cv.dat tested on v2.6 tested on master

Last tested: 18 Oct 2020, 14:53:02

Project description and instructions
this is a metadynamic metainference Martini calculation using SAXS. Simulations are performed with gromacs 2016 or newer

Submission history
[v1] 14 Apr 2020: original submission
[v2] 15 Oct 2020: updated doi

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plumeDnest:20.009