Project ID: plumID:20.009
Name: The dynamics of linear polyubiquitin
Category: bio
Keywords: saxs, martini, metainference, metadynamics, ubiquitin, protein dynamics
PLUMED version: 2.6
Contributor: Carlo Camilloni
Submitted on: 14 Apr 2020
Last revised: 15 Oct 2020
Publication: A. Jussupow, A. C. Messias, R. Stehle, A. Geerlof, S. M. Ø. Solbak, C. Paissoni, A. Bach, M. Sattler, C. Camilloni, The dynamics of linear polyubiquitin. Science Advances. 6 (2020)

PLUMED input files

File Compatible with
Ub2/plumed-cv.dat tested on v2.9 tested on master
Ub3/plumed-cv.dat tested on v2.9 tested on master
Ub4/plumed-cv.dat tested on v2.9 tested on master

Last tested: 26 Feb 2024, 07:26:34

Project description and instructions
this is a metadynamic metainference Martini calculation using SAXS. Simulations are performed with gromacs 2016 or newer

Submission history
[v1] 14 Apr 2020: original submission
[v2] 15 Oct 2020: updated doi

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