Project ID: plumID:19.070
Name: Unexpected Dynamics in the UUCG RNA Tetraloop
Category: bio
Keywords: well-tempered metadynamics, RNA, UUCG, maximum entropy
PLUMED version: 2.5
Contributor: Sandro Bottaro
Submitted on: 23 Sep 2019
Last revised: 17 Jun 2020
Publication: S. Bottaro, P. J. Nichols, B. Vögeli, M. Parrinello, K. Lindorff-Larsen, Integrating NMR and simulations reveals motions in the UUCG tetraloop. Nucleic Acids Research. 48, 5839–5848 (2020)

PLUMED input files

File Compatible with
plumed_nest_uucg/plumed.dat tested on v2.9 tested on master

Last tested: 26 Feb 2024, 07:27:03

Project description and instructions
Simulations have been carried out with GROMACS 2016.4 and PLUMED 2.5.0. More information here.

Submission history
[v1] 23 Sep 2019: original submission
[v2] 17 Jun 2020: updated doi

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