PLUMED-NEST

Project ID: plumID:19.013
Source: apply_corrections/plumed.dat
Originally used with PLUMED version: 2.4
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes

# vim: ft=plumedEnables syntax highlighting for PLUMED files in vim. See here for more details. 
INCLUDEIncludes an external input file, similar to #include in C preprocessor. More details. Show included file FILEfile to be included=cv.dat
# The command:
# INCLUDE FILE=cv.dat
# ensures PLUMED loads the contents of the file called cv.dat
# The contents of this file are shown below (click the red comment to hide them).
The INCLUDE action with label cv.dat calculates somethingMOLINFOThis command is used to provide information on the molecules that are present in your system. More details STRUCTUREa file in pdb format containing a reference structure=AAAA.pdb  MOLTYPE what kind of molecule is contained in the pdb file - usually not needed since protein/RNA/DNA are compatible=rna
 
#Number of total residues: 4
#Number of biased residues: 4
 
###########################
#### Torsions
###########################
 
#### alpha
 
The MOLINFO action with label  calculates somethinga2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-2the four atoms that are required to calculate the alpha backbone dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label a2 calculates the following quantities:
 Quantity   
 Description  
a2.value
the TORSION involving these atomsa3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-3the four atoms that are required to calculate the alpha backbone dihedral for residue 3. Click here for more information.  #biased
The TORSION action with label a3 calculates the following quantities:
 Quantity   
 Description  
a3.value
the TORSION involving these atomsa4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-4the four atoms that are required to calculate the alpha backbone dihedral for residue 4. Click here for more information.  #biased
 
#### beta
 
The TORSION action with label a4 calculates the following quantities:
 Quantity   
 Description  
a4.value
the TORSION involving these atomsb2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-2the four atoms that are required to calculate the beta backbone dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label b2 calculates the following quantities:
 Quantity   
 Description  
b2.value
the TORSION involving these atomsb3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-3the four atoms that are required to calculate the beta backbone dihedral for residue 3. Click here for more information.  #biased
The TORSION action with label b3 calculates the following quantities:
 Quantity   
 Description  
b3.value
the TORSION involving these atomsb4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-4the four atoms that are required to calculate the beta backbone dihedral for residue 4. Click here for more information.  #biased
 
#### gamma
 
The TORSION action with label b4 calculates the following quantities:
 Quantity   
 Description  
b4.value
the TORSION involving these atomsg1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-1the four atoms that are required to calculate the gamma backbone dihedral for residue 1. Click here for more information.  #biased
The TORSION action with label g1 calculates the following quantities:
 Quantity   
 Description  
g1.value
the TORSION involving these atomsg2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-2the four atoms that are required to calculate the gamma backbone dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label g2 calculates the following quantities:
 Quantity   
 Description  
g2.value
the TORSION involving these atomsg3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-3the four atoms that are required to calculate the gamma backbone dihedral for residue 3. Click here for more information.  #biased
The TORSION action with label g3 calculates the following quantities:
 Quantity   
 Description  
g3.value
the TORSION involving these atomsg4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-4the four atoms that are required to calculate the gamma backbone dihedral for residue 4. Click here for more information.  #biased
 
#### epsilon
 
The TORSION action with label g4 calculates the following quantities:
 Quantity   
 Description  
g4.value
the TORSION involving these atomse1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-1the four atoms that are required to calculate the backbone epsilon dihedral for residue 1. Click here for more information.  #biased
The TORSION action with label e1 calculates the following quantities:
 Quantity   
 Description  
e1.value
the TORSION involving these atomse2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-2the four atoms that are required to calculate the backbone epsilon dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label e2 calculates the following quantities:
 Quantity   
 Description  
e2.value
the TORSION involving these atomse3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-3the four atoms that are required to calculate the backbone epsilon dihedral for residue 3. Click here for more information.  #biased
 
#### zeta
 
The TORSION action with label e3 calculates the following quantities:
 Quantity   
 Description  
e3.value
the TORSION involving these atomsz1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-1the four atoms that are required to calculate the zeta backbone dihedral for residue 1. Click here for more information.  #biased
The TORSION action with label z1 calculates the following quantities:
 Quantity   
 Description  
z1.value
the TORSION involving these atomsz2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-2the four atoms that are required to calculate the zeta backbone dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label z2 calculates the following quantities:
 Quantity   
 Description  
z2.value
the TORSION involving these atomsz3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-3the four atoms that are required to calculate the zeta backbone dihedral for residue 3. Click here for more information.  #biased
 
#### chi
 
The TORSION action with label z3 calculates the following quantities:
 Quantity   
 Description  
z3.value
the TORSION involving these atomsc1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-1the four atoms that are required to alcullate the chi dihedral for residue 1. Click here for more information.  #biased
The TORSION action with label c1 calculates the following quantities:
 Quantity   
 Description  
c1.value
the TORSION involving these atomsc2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-2the four atoms that are required to alcullate the chi dihedral for residue 2. Click here for more information.  #biased
The TORSION action with label c2 calculates the following quantities:
 Quantity   
 Description  
c2.value
the TORSION involving these atomsc3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-3the four atoms that are required to alcullate the chi dihedral for residue 3. Click here for more information.  #biased
The TORSION action with label c3 calculates the following quantities:
 Quantity   
 Description  
c3.value
the TORSION involving these atomsc4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-4the four atoms that are required to alcullate the chi dihedral for residue 4. Click here for more information.  #biased
 
###########################
#### Puckering
###########################

The TORSION action with label c4 calculates the following quantities:
 Quantity   
 Description  
c4.value
the TORSION involving these atomspuck1: PUCKERINGCalculate sugar pseudorotation coordinates. More details ATOMSthe five or six atoms of the sugar ring in the proper order=@sugar-1the heavy atoms of the sugar in residue 1. Click here for more information.   #biased
The PUCKERING action with label puck1 calculates the following quantities:
 Quantity   
 Description  
puck1.phs
Pseudorotation phase (5 membered rings)
puck1.amp
Pseudorotation amplitude (5 membered rings)
puck1.Zx
Pseudorotation x Cartesian component (5 membered rings)
puck1.Zy
Pseudorotation y Cartesian component (5 membered rings)
puck1.phi
Pseudorotation phase (6 membered rings)
puck1.theta
Theta angle (6 membered rings)
puck1.amplitude
Pseudorotation amplitude (6 membered rings)
puck1.qx
Cartesian component x (6 membered rings)
puck1.qy
Cartesian component y (6 membered rings)
puck1.qz
Cartesian component z (6 membered rings)puck2: PUCKERINGCalculate sugar pseudorotation coordinates. More details ATOMSthe five or six atoms of the sugar ring in the proper order=@sugar-2the heavy atoms of the sugar in residue 2. Click here for more information.   #biased
The PUCKERING action with label puck2 calculates the following quantities:
 Quantity   
 Description  
puck2.phs
Pseudorotation phase (5 membered rings)
puck2.amp
Pseudorotation amplitude (5 membered rings)
puck2.Zx
Pseudorotation x Cartesian component (5 membered rings)
puck2.Zy
Pseudorotation y Cartesian component (5 membered rings)
puck2.phi
Pseudorotation phase (6 membered rings)
puck2.theta
Theta angle (6 membered rings)
puck2.amplitude
Pseudorotation amplitude (6 membered rings)
puck2.qx
Cartesian component x (6 membered rings)
puck2.qy
Cartesian component y (6 membered rings)
puck2.qz
Cartesian component z (6 membered rings)puck3: PUCKERINGCalculate sugar pseudorotation coordinates. More details ATOMSthe five or six atoms of the sugar ring in the proper order=@sugar-3the heavy atoms of the sugar in residue 3. Click here for more information.   #biased
The PUCKERING action with label puck3 calculates the following quantities:
 Quantity   
 Description  
puck3.phs
Pseudorotation phase (5 membered rings)
puck3.amp
Pseudorotation amplitude (5 membered rings)
puck3.Zx
Pseudorotation x Cartesian component (5 membered rings)
puck3.Zy
Pseudorotation y Cartesian component (5 membered rings)
puck3.phi
Pseudorotation phase (6 membered rings)
puck3.theta
Theta angle (6 membered rings)
puck3.amplitude
Pseudorotation amplitude (6 membered rings)
puck3.qx
Cartesian component x (6 membered rings)
puck3.qy
Cartesian component y (6 membered rings)
puck3.qz
Cartesian component z (6 membered rings)puck4: PUCKERINGCalculate sugar pseudorotation coordinates. More details ATOMSthe five or six atoms of the sugar ring in the proper order=@sugar-4the heavy atoms of the sugar in residue 4. Click here for more information.   #biased
 
# --- End of included input --- The PUCKERING action with label puck4 calculates the following quantities:
 Quantity   
 Description  
puck4.phs
Pseudorotation phase (5 membered rings)
puck4.amp
Pseudorotation amplitude (5 membered rings)
puck4.Zx
Pseudorotation x Cartesian component (5 membered rings)
puck4.Zy
Pseudorotation y Cartesian component (5 membered rings)
puck4.phi
Pseudorotation phase (6 membered rings)
puck4.theta
Theta angle (6 membered rings)
puck4.amplitude
Pseudorotation amplitude (6 membered rings)
puck4.qx
Cartesian component x (6 membered rings)
puck4.qy
Cartesian component y (6 membered rings)
puck4.qz
Cartesian component z (6 membered rings)INCLUDEIncludes an external input file, similar to #include in C preprocessor. More details. Show included file FILEfile to be included=bias
# The command:
# INCLUDE FILE=bias
# ensures PLUMED loads the contents of the file called bias
# The contents of this file are shown below (click the red comment to hide them).
# vim: ft=plumedEnables syntax highlighting for PLUMED files in vim. See here for more details. 
The INCLUDE action with label bias calculates somethingalpha2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-2the four atoms that are required to calculate the alpha backbone dihedral for residue 2. Click here for more information. 
The TORSION action with label alpha2 calculates the following quantities:
 Quantity   
 Description  
alpha2.value
the TORSION involving these atomsbeta2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-2the four atoms that are required to calculate the beta backbone dihedral for residue 2. Click here for more information. 
The TORSION action with label beta2 calculates the following quantities:
 Quantity   
 Description  
beta2.value
the TORSION involving these atomsalpha3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-3the four atoms that are required to calculate the alpha backbone dihedral for residue 3. Click here for more information. 
The TORSION action with label alpha3 calculates the following quantities:
 Quantity   
 Description  
alpha3.value
the TORSION involving these atomsbeta3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-3the four atoms that are required to calculate the beta backbone dihedral for residue 3. Click here for more information. 
The TORSION action with label beta3 calculates the following quantities:
 Quantity   
 Description  
beta3.value
the TORSION involving these atomsalpha4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@alpha-4the four atoms that are required to calculate the alpha backbone dihedral for residue 4. Click here for more information. 
The TORSION action with label alpha4 calculates the following quantities:
 Quantity   
 Description  
alpha4.value
the TORSION involving these atomsbeta4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@beta-4the four atoms that are required to calculate the beta backbone dihedral for residue 4. Click here for more information. 
The TORSION action with label beta4 calculates the following quantities:
 Quantity   
 Description  
beta4.value
the TORSION involving these atomschi1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-1the four atoms that are required to alcullate the chi dihedral for residue 1. Click here for more information. 
The TORSION action with label chi1 calculates the following quantities:
 Quantity   
 Description  
chi1.value
the TORSION involving these atomschi2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-2the four atoms that are required to alcullate the chi dihedral for residue 2. Click here for more information. 
The TORSION action with label chi2 calculates the following quantities:
 Quantity   
 Description  
chi2.value
the TORSION involving these atomschi3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-3the four atoms that are required to alcullate the chi dihedral for residue 3. Click here for more information. 
The TORSION action with label chi3 calculates the following quantities:
 Quantity   
 Description  
chi3.value
the TORSION involving these atomschi4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@chi-4the four atoms that are required to alcullate the chi dihedral for residue 4. Click here for more information. 
The TORSION action with label chi4 calculates the following quantities:
 Quantity   
 Description  
chi4.value
the TORSION involving these atomszeta1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-1the four atoms that are required to calculate the zeta backbone dihedral for residue 1. Click here for more information. 
The TORSION action with label zeta1 calculates the following quantities:
 Quantity   
 Description  
zeta1.value
the TORSION involving these atomsepsilon1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-1the four atoms that are required to calculate the backbone epsilon dihedral for residue 1. Click here for more information. 
The TORSION action with label epsilon1 calculates the following quantities:
 Quantity   
 Description  
epsilon1.value
the TORSION involving these atomszeta2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-2the four atoms that are required to calculate the zeta backbone dihedral for residue 2. Click here for more information. 
The TORSION action with label zeta2 calculates the following quantities:
 Quantity   
 Description  
zeta2.value
the TORSION involving these atomsepsilon2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-2the four atoms that are required to calculate the backbone epsilon dihedral for residue 2. Click here for more information. 
The TORSION action with label epsilon2 calculates the following quantities:
 Quantity   
 Description  
epsilon2.value
the TORSION involving these atomszeta3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@zeta-3the four atoms that are required to calculate the zeta backbone dihedral for residue 3. Click here for more information. 
The TORSION action with label zeta3 calculates the following quantities:
 Quantity   
 Description  
zeta3.value
the TORSION involving these atomsepsilon3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@epsilon-3the four atoms that are required to calculate the backbone epsilon dihedral for residue 3. Click here for more information. 
The TORSION action with label epsilon3 calculates the following quantities:
 Quantity   
 Description  
epsilon3.value
the TORSION involving these atomsgamma1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-1the four atoms that are required to calculate the gamma backbone dihedral for residue 1. Click here for more information. 
The TORSION action with label gamma1 calculates the following quantities:
 Quantity   
 Description  
gamma1.value
the TORSION involving these atomsdelta1: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@delta-1the four atoms that are required to calculate the delta backbone dihedral for residue 1. Click here for more information. 
The TORSION action with label delta1 calculates the following quantities:
 Quantity   
 Description  
delta1.value
the TORSION involving these atomsgamma2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-2the four atoms that are required to calculate the gamma backbone dihedral for residue 2. Click here for more information. 
The TORSION action with label gamma2 calculates the following quantities:
 Quantity   
 Description  
gamma2.value
the TORSION involving these atomsdelta2: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@delta-2the four atoms that are required to calculate the delta backbone dihedral for residue 2. Click here for more information. 
The TORSION action with label delta2 calculates the following quantities:
 Quantity   
 Description  
delta2.value
the TORSION involving these atomsgamma3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-3the four atoms that are required to calculate the gamma backbone dihedral for residue 3. Click here for more information. 
The TORSION action with label gamma3 calculates the following quantities:
 Quantity   
 Description  
gamma3.value
the TORSION involving these atomsdelta3: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@delta-3the four atoms that are required to calculate the delta backbone dihedral for residue 3. Click here for more information. 
The TORSION action with label delta3 calculates the following quantities:
 Quantity   
 Description  
delta3.value
the TORSION involving these atomsgamma4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@gamma-4the four atoms that are required to calculate the gamma backbone dihedral for residue 4. Click here for more information. 
The TORSION action with label gamma4 calculates the following quantities:
 Quantity   
 Description  
gamma4.value
the TORSION involving these atomsdelta4: TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=@delta-4the four atoms that are required to calculate the delta backbone dihedral for residue 4. Click here for more information. 
The TORSION action with label delta4 calculates the following quantities:
 Quantity   
 Description  
delta4.value
the TORSION involving these atomssumcosalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(1*v2)+cos(1*v3)+cos(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcosalpha calculates the following quantities:
 Quantity   
 Description  
sumcosalpha.value
an arbitrary functionsumsinalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(1*v2)+sin(1*v3)+sin(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsinalpha calculates the following quantities:
 Quantity   
 Description  
sumsinalpha.value
an arbitrary function2sumcosalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(2*v2)+cos(2*v3)+cos(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcosalpha calculates the following quantities:
 Quantity   
 Description  
2sumcosalpha.value
an arbitrary function2sumsinalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(2*v2)+sin(2*v3)+sin(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsinalpha calculates the following quantities:
 Quantity   
 Description  
2sumsinalpha.value
an arbitrary function3sumcosalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(3*v2)+cos(3*v3)+cos(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcosalpha calculates the following quantities:
 Quantity   
 Description  
3sumcosalpha.value
an arbitrary function3sumsinalpha: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=alpha2,alpha3,alpha4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(3*v2)+sin(3*v3)+sin(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsinalpha calculates the following quantities:
 Quantity   
 Description  
3sumsinalpha.value
an arbitrary functionsumcosbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(1*v2)+cos(1*v3)+cos(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcosbeta calculates the following quantities:
 Quantity   
 Description  
sumcosbeta.value
an arbitrary functionsumsinbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(1*v2)+sin(1*v3)+sin(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsinbeta calculates the following quantities:
 Quantity   
 Description  
sumsinbeta.value
an arbitrary function2sumcosbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(2*v2)+cos(2*v3)+cos(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcosbeta calculates the following quantities:
 Quantity   
 Description  
2sumcosbeta.value
an arbitrary function2sumsinbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(2*v2)+sin(2*v3)+sin(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsinbeta calculates the following quantities:
 Quantity   
 Description  
2sumsinbeta.value
an arbitrary function3sumcosbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=cos(3*v2)+cos(3*v3)+cos(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcosbeta calculates the following quantities:
 Quantity   
 Description  
3sumcosbeta.value
an arbitrary function3sumsinbeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=beta2,beta3,beta4 VARthe names to give each of the arguments in the function=v2,v3,v4 FUNCthe function you wish to evaluate=sin(3*v2)+sin(3*v3)+sin(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsinbeta calculates the following quantities:
 Quantity   
 Description  
3sumsinbeta.value
an arbitrary functionsumcosgamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(1*v1)+cos(1*v2)+cos(1*v3)+cos(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcosgamma calculates the following quantities:
 Quantity   
 Description  
sumcosgamma.value
an arbitrary functionsumsingamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(1*v1)+sin(1*v2)+sin(1*v3)+sin(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsingamma calculates the following quantities:
 Quantity   
 Description  
sumsingamma.value
an arbitrary function2sumcosgamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(2*v1)+cos(2*v2)+cos(2*v3)+cos(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcosgamma calculates the following quantities:
 Quantity   
 Description  
2sumcosgamma.value
an arbitrary function2sumsingamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(2*v1)+sin(2*v2)+sin(2*v3)+sin(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsingamma calculates the following quantities:
 Quantity   
 Description  
2sumsingamma.value
an arbitrary function3sumcosgamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(3*v1)+cos(3*v2)+cos(3*v3)+cos(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcosgamma calculates the following quantities:
 Quantity   
 Description  
3sumcosgamma.value
an arbitrary function3sumsingamma: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=gamma1,gamma2,gamma3,gamma4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(3*v1)+sin(3*v2)+sin(3*v3)+sin(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsingamma calculates the following quantities:
 Quantity   
 Description  
3sumsingamma.value
an arbitrary functionsumcosdelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(1*v1)+cos(1*v2)+cos(1*v3)+cos(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcosdelta calculates the following quantities:
 Quantity   
 Description  
sumcosdelta.value
an arbitrary functionsumsindelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(1*v1)+sin(1*v2)+sin(1*v3)+sin(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsindelta calculates the following quantities:
 Quantity   
 Description  
sumsindelta.value
an arbitrary function2sumcosdelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(2*v1)+cos(2*v2)+cos(2*v3)+cos(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcosdelta calculates the following quantities:
 Quantity   
 Description  
2sumcosdelta.value
an arbitrary function2sumsindelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(2*v1)+sin(2*v2)+sin(2*v3)+sin(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsindelta calculates the following quantities:
 Quantity   
 Description  
2sumsindelta.value
an arbitrary function3sumcosdelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(3*v1)+cos(3*v2)+cos(3*v3)+cos(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcosdelta calculates the following quantities:
 Quantity   
 Description  
3sumcosdelta.value
an arbitrary function3sumsindelta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=delta1,delta2,delta3,delta4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(3*v1)+sin(3*v2)+sin(3*v3)+sin(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsindelta calculates the following quantities:
 Quantity   
 Description  
3sumsindelta.value
an arbitrary functionsumcosepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(1*v1)+cos(1*v2)+cos(1*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcosepsilon calculates the following quantities:
 Quantity   
 Description  
sumcosepsilon.value
an arbitrary functionsumsinepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(1*v1)+sin(1*v2)+sin(1*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsinepsilon calculates the following quantities:
 Quantity   
 Description  
sumsinepsilon.value
an arbitrary function2sumcosepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(2*v1)+cos(2*v2)+cos(2*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcosepsilon calculates the following quantities:
 Quantity   
 Description  
2sumcosepsilon.value
an arbitrary function2sumsinepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(2*v1)+sin(2*v2)+sin(2*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsinepsilon calculates the following quantities:
 Quantity   
 Description  
2sumsinepsilon.value
an arbitrary function3sumcosepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(3*v1)+cos(3*v2)+cos(3*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcosepsilon calculates the following quantities:
 Quantity   
 Description  
3sumcosepsilon.value
an arbitrary function3sumsinepsilon: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=epsilon1,epsilon2,epsilon3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(3*v1)+sin(3*v2)+sin(3*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsinepsilon calculates the following quantities:
 Quantity   
 Description  
3sumsinepsilon.value
an arbitrary functionsumcoszeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(1*v1)+cos(1*v2)+cos(1*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumcoszeta calculates the following quantities:
 Quantity   
 Description  
sumcoszeta.value
an arbitrary functionsumsinzeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(1*v1)+sin(1*v2)+sin(1*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label sumsinzeta calculates the following quantities:
 Quantity   
 Description  
sumsinzeta.value
an arbitrary function2sumcoszeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(2*v1)+cos(2*v2)+cos(2*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumcoszeta calculates the following quantities:
 Quantity   
 Description  
2sumcoszeta.value
an arbitrary function2sumsinzeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(2*v1)+sin(2*v2)+sin(2*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2sumsinzeta calculates the following quantities:
 Quantity   
 Description  
2sumsinzeta.value
an arbitrary function3sumcoszeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=cos(3*v1)+cos(3*v2)+cos(3*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumcoszeta calculates the following quantities:
 Quantity   
 Description  
3sumcoszeta.value
an arbitrary function3sumsinzeta: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=zeta1,zeta2,zeta3 VARthe names to give each of the arguments in the function=v1,v2,v3 FUNCthe function you wish to evaluate=sin(3*v1)+sin(3*v2)+sin(3*v3) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3sumsinzeta calculates the following quantities:
 Quantity   
 Description  
3sumsinzeta.value
an arbitrary functionpursumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(1*v1)+cos(1*v2)+cos(1*v3)+cos(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label pursumcoschi calculates the following quantities:
 Quantity   
 Description  
pursumcoschi.value
an arbitrary function2pursumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(2*v1)+cos(2*v2)+cos(2*v3)+cos(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2pursumcoschi calculates the following quantities:
 Quantity   
 Description  
2pursumcoschi.value
an arbitrary function3pursumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=cos(3*v1)+cos(3*v2)+cos(3*v3)+cos(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3pursumcoschi calculates the following quantities:
 Quantity   
 Description  
3pursumcoschi.value
an arbitrary functionpursumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(1*v1)+sin(1*v2)+sin(1*v3)+sin(1*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label pursumsinchi calculates the following quantities:
 Quantity   
 Description  
pursumsinchi.value
an arbitrary function2pursumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(2*v1)+sin(2*v2)+sin(2*v3)+sin(2*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2pursumsinchi calculates the following quantities:
 Quantity   
 Description  
2pursumsinchi.value
an arbitrary function3pursumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=sin(3*v1)+sin(3*v2)+sin(3*v3)+sin(3*v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3pursumsinchi calculates the following quantities:
 Quantity   
 Description  
3pursumsinchi.value
an arbitrary functionpyrsumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label pyrsumcoschi calculates the following quantities:
 Quantity   
 Description  
pyrsumcoschi.value
an arbitrary function2pyrsumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2pyrsumcoschi calculates the following quantities:
 Quantity   
 Description  
2pyrsumcoschi.value
an arbitrary function3pyrsumcoschi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3pyrsumcoschi calculates the following quantities:
 Quantity   
 Description  
3pyrsumcoschi.value
an arbitrary functionpyrsumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label pyrsumsinchi calculates the following quantities:
 Quantity   
 Description  
pyrsumsinchi.value
an arbitrary function2pyrsumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 2pyrsumsinchi calculates the following quantities:
 Quantity   
 Description  
2pyrsumsinchi.value
an arbitrary function3pyrsumsinchi: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=chi1,chi2,chi3,chi4 VARthe names to give each of the arguments in the function=v1,v2,v3,v4 FUNCthe function you wish to evaluate=0*(v1)+0*(v2)+0*(v3)+0*(v4) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label 3pyrsumsinchi calculates the following quantities:
 Quantity   
 Description  
3pyrsumsinchi.value
an arbitrary functionkbt: CONSTANTCreate a constant value that can be passed to actions More details VALUEthe single number that you would like to store=2.5
The CONSTANT action with label kbt calculates the following quantities:
 Quantity   
 Description  
kbt.value
the constant value that was read from the plumed inputmybias: MATHEVALAn alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details ARGthe values input to this function=kbt,sumcosalpha,sumcosbeta,sumcosgamma,sumcosdelta,sumcosepsilon,sumcoszeta,sumsinalpha,sumsinbeta,sumsingamma,sumsindelta,sumsinepsilon,sumsinzeta,pursumcoschi,pyrsumcoschi,pursumsinchi,pyrsumsinchi,2sumcosalpha,2sumcosbeta,2sumcosgamma,2sumcosdelta,2sumcosepsilon,2sumcoszeta,2sumsinalpha,2sumsinbeta,2sumsingamma,2sumsindelta,2sumsinepsilon,2sumsinzeta,2pursumcoschi,2pyrsumcoschi,2pursumsinchi,2pyrsumsinchi,3sumcosalpha,3sumcosbeta,3sumcosgamma,3sumcosdelta,3sumcosepsilon,3sumcoszeta,3sumsinalpha,3sumsinbeta,3sumsingamma,3sumsindelta,3sumsinepsilon,3sumsinzeta,3pursumcoschi,3pyrsumcoschi,3pursumsinchi,3pyrsumsinchi VARthe names to give each of the arguments in the function=kbt,v1,v2,v3,v4,v5,v6,v7,v8,v9,v10,v11,v12,v13,v14,v15,v16,v17,v18,v19,v20,v21,v22,v23,v24,v25,v26,v27,v28,v29,v30,v31,v32,v33,v34,v35,v36,v37,v38,v39,v40,v41,v42,v43,v44,v45,v46,v47,v48 FUNCthe function you wish to evaluate=kbt*((0.028743*v1)+(-0.118088*v2)+(0.369240*v3)+(-0.068875*v4)+(-0.061779*v5)+(-0.083563*v6)+(0.045960*v7)+(-0.085707*v8)+(0.080645*v9)+(-0.011406*v10)+(0.038967*v11)+(0.220101*v12)+(-0.007880*v13)+(0.067727*v14)+(-0.086418*v15)+(-0.014430*v16)+(-0.135683*v17)+(0.199287*v18)+(-0.269494*v19)+(0.035808*v20)+(0.086680*v21)+(0.091654*v22)+(0.064641*v23)+(0.008920*v24)+(0.190771*v25)+(-0.109477*v26)+(0.054064*v27)+(0.150732*v28)+(-0.054599*v29)+(-0.116106*v30)+(-0.073151*v31)+(-0.046067*v32)+(0.122662*v33)+(-0.064958*v34)+(-0.001949*v35)+(0.109930*v36)+(0.042434*v37)+(0.061681*v38)+(0.032150*v39)+(0.016087*v40)+(0.020993*v41)+(0.051061*v42)+(-0.077758*v43)+(0.015956*v44)+(0.016977*v45)+(0.037457*v46)+(0.143994*v47)+(0.140334*v48)) PERIODICif the output of your function is periodic then you should specify the periodicity of the function=NO
The MATHEVAL action with label mybias calculates the following quantities:
 Quantity   
 Description  
mybias.value
an arbitrary functionBIASVALUETakes the value of one variable and use it as a bias More details ARGthe labels of the scalar/vector arguments whose values will be used as a bias on the system=mybias
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