PLUMED-NEST by plumed-nest

Project ID: plumID:26.001
Name: Molecular simulations Alx riboswitch
Archive: https://github.com/Tomfersil/Alx-Riboswitch-MD/archive/3b14de14af9ca408d4267ab15953d7b30192a0b4.zip (browse)
Category: bio
Keywords: RNA, riboswitch
PLUMED version: 2.8
Contributor: Giovanni Bussi
Submitted on: 14 Jan 2026
Publication: unpublished

PLUMED input files

File	Compatible with
…bble-Prot/4-Steered/chain-A/rep2/steered_A_P_2.dat
…bble-Prot/4-Steered/chain-A/rep1/steered_A_P_1.dat
…bble-Prot/4-Steered/chain-C/rep2/steered_C_P_2.dat
…-Steered/chain-C/rep2/plumed_test_metad_params.dat
…bble-Prot/4-Steered/chain-C/rep1/steered_C_P_1.dat
…bble-Prot/4-Steered/chain-D/rep2/steered_D_P_2.dat
…bble-Prot/4-Steered/chain-D/rep1/steered_D_P_1.dat
…bble-Prot/4-Steered/chain-B/rep2/steered_B_P_2.dat
…bble-Prot/4-Steered/chain-B/rep1/steered_B_P_1.dat
…s/Wobble-Prot/5-Equil/chain-A/rep2/equil_A_P_2.dat
…s/Wobble-Prot/5-Equil/chain-A/rep1/equil_A_P_1.dat
…s/Wobble-Prot/5-Equil/chain-C/rep2/equil_C_P_2.dat
…/5-Equil/chain-C/rep2/plumed_test_metad_params.dat
…s/Wobble-Prot/5-Equil/chain-C/rep1/equil_C_P_1.dat
…s/Wobble-Prot/5-Equil/chain-D/rep2/equil_D_P_2.dat
…s/Wobble-Prot/5-Equil/chain-D/rep1/equil_D_P_1.dat
…s/Wobble-Prot/5-Equil/chain-B/rep2/equil_B_P_2.dat
…s/Wobble-Prot/5-Equil/chain-B/rep1/equil_B_P_1.dat
…tive-Deprot/4-Steered/chain-A/rep2/steered_A_2.dat
…tive-Deprot/4-Steered/chain-A/rep1/steered_A_1.dat

Last tested: 15 Jan 2026, 17:00:22

Project description and instructions
This repository stores input files and scripts used in MD simulations of the alx riboswitch.

Click here to open manual pages for actions used in this project.

Submission history
[v1] 14 Jan 2026: original submission

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