Project ID: plumID:25.018
Name: Metainference simulation for dimerization of RNA binding protein
Archive: https://github.com/debadutta-patra/dsRBD_dimerization_plumed/archive/refs/heads/main.zip
Category: bio
Keywords: Metainference, Metadynamics, SAXS, protein dimer
PLUMED version: 2.9
Contributor: Debadutta Patra
Submitted on: 21 Jun 2025
Publication: unpublished

PLUMED input files

File Compatible with
./dsRBD_dimer/plumed.dat tested on v2.10 tested on master

Last tested: 30 Jun 2025, 09:31:01

Project description and instructions
The code used is gromacs-2022.5 with PLUMED v2.9. The command line to run the simulation is mpirun -np # gmx_mpi mdrun -deffnm topol.tpr -multidir rep_* -plumed plumed.dat.

Click here to open manual pages for actions used in this project.

Submission history
[v1] 21 Jun 2025: original submission

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plumeDnest:25.018