Project ID: plumID:24.016
Name: Cryo-EM guided simulations of ribozyme
Archive: https://github.com/ElisPo/Cryo-EM-refinement/archive/main.zip (browse)
Category: bio
Keywords: metainference, cryo-EM
PLUMED version: 2.9
Contributor: Giovanni Bussi
Submitted on: 17 Jul 2024
Last revised: 22 May 2025
Publication: E. Posani, P. Janoš, D. Haack, N. Toor, M. Bonomi, A. Magistrato, G. Bussi, Ensemble refinement of mismodeled cryo-EM RNA structures using all-atom simulations. Nature Communications. 16 (2025)
PLUMED input files
| File | Compatible with |
|---|---|
| 2-ss-refinement/plumed_EMMI.dat |   |
| 3-ensemble-refinement/plumed_EMMI.dat | |
| 3-ensemble-refinement/plumed_EMMI_norst.dat | |
Last tested: 19 Jun 2025, 09:36:12
Project description and instructions
PLUMED input files for single structure refinement and ensemble refinement.
Click here to open manual pages for actions used in this project.
Submission history
[v1] 17 Jul 2024: original submission
[v2] 22 May 2025: added journal doi
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