Project ID: plumID:24.009
Name: Weighted Shape Gaussian Mixture Models
Archive: https://github.com/hocky-research-group/weighted-SGMM-paper/raw/main/wSGMM_plumed_nest.zip
Category: bio
Keywords: metadynamics, clustering
PLUMED version: 2.8-mod
Contributor: Glen Hocky
Submitted on: 31 Mar 2024
Publication: DOI not found

PLUMED input files

File Compatible with
actin_lda_setup/plumed.dat tested on v2.10 tested on master with custom code
adp_metad_sims/metad_bf_10/plumed_reweight.dat tested on v2.10 tested on master with custom code
…p_metad_sims/metad_bf_10_run-1/plumed_reweight.dat tested on v2.10 tested on master with custom code
…p_metad_sims/metad_bf_10_run-2/plumed_reweight.dat tested on v2.10 tested on master with custom code
…p_metad_sims/metad_bf_10_run-3/plumed_reweight.dat tested on v2.10 tested on master with custom code
…p_metad_sims/metad_bf_10_run-4/plumed_reweight.dat tested on v2.10 tested on master with custom code
adp_metad_sims/untempered/plumed_reweight.dat tested on v2.10 tested on master with custom code

Last tested: 23 Apr 2025, 10:11:54

Project description and instructions
All files for running and analysis are give at this website. This includes plumed source files for position LDA code. Software used include gromacs and lammps.

Submission history
[v1] 31 Mar 2024: original submission

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plumeDnest:24.009