Project ID: plumID:23.019
Stderr for source: plm_path_sketchmap/sketch-map/plumed_map_to_reference_map.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/PlumedMain.cpp:824) void PLMD::PlumedMain::readInputWords(const std::vector<std::__cxx11::basic_string>&) ERROR I cannot understand line: SKETCHMAP_PROJECTION LABEL=smap ARG=d1,d2,d3,d4,d5,d6,d7,d8,d9,d10,d11,d12,d13,d14,d15,d16,d17,d18,d19,d20,d21,d22,d23,d24,d25,d26,d27,d28,d29,d30,d31,d32,d33,d34,d35,d36,d37,d38,d39,d40,d41,d42,d43,d44,d45,d46,d47,d48,d49,d50,d51 REFERENCE=ref_data.pdb PROPERTY=smap_coord-1,smap_coord-2 WEIGHT=lwe HIGH_DIM_FUNCTION=SMAP R_0=1.5 A=2 B=2 LOW_DIM_FUNCTION=SMAP R_0=1.5 A=2 B=2 CGTOL=1E-3 Maybe a missing space or a typo? [fv-az1242-903:04893] *** Process received signal *** [fv-az1242-903:04893] Signal: Aborted (6) [fv-az1242-903:04893] Signal code: (-6) [fv-az1242-903:04893] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f6aa6042520] [fv-az1242-903:04893] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f6aa60969fc] [fv-az1242-903:04893] [ 2] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f6aa6042476] [fv-az1242-903:04893] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f6aa60287f3] [fv-az1242-903:04893] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa4f26)[0x7f6aa64a4f26] [fv-az1242-903:04893] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6d9c)[0x7f6aa64b6d9c] [fv-az1242-903:04893] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6e07)[0x7f6aa64b6e07] [fv-az1242-903:04893] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(__cxa_rethrow+0x4b)[0x7f6aa64b70bb] [fv-az1242-903:04893] [ 8] plumed(+0x12f48)[0x561fe0684f48] [fv-az1242-903:04893] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f6aa6029d90] [fv-az1242-903:04893] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f6aa6029e40] [fv-az1242-903:04893] [11] plumed(+0x131e5)[0x561fe06851e5] [fv-az1242-903:04893] *** End of error message *** </pre>