Project ID: plumID:22.036
Stderr for source: plumed.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above WARNING: using a legacy ActionRegister.h include path, please use <<#include "core/ActionRegister.h">> WARNING: "core/Atoms.h" does not exist anymore in version >=2.10, you should change your code. In file included from /home/runner/opt/include/plumed_master/colvar/../core/../tools/Keywords.h:30, from /home/runner/opt/include/plumed_master/colvar/../core/Action.h:27, from /home/runner/opt/include/plumed_master/colvar/../core/ActionAtomistic.h:25, from /home/runner/opt/include/plumed_master/colvar/../core/Colvar.h:25, from /home/runner/opt/include/plumed_master/colvar/Colvar.h:24, from /home/runner/opt/include/plumed_master/colvar/CoordinationBase.h:24, from ./GHBFIX.9nEmjZ.cpp:22: ./GHBFIX.9nEmjZ.cpp: In constructor ‘PLMD::colvar::GHBFIX::GHBFIX(const PLMD::ActionOptions&)’: ./GHBFIX.9nEmjZ.cpp:139:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 139 | plumed_assert(it<n)<<"itype ="<<it<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed_master/colvar/../core/../tools/Exception.h:376:34: note: in definition of macro ‘plumed_assert’ 376 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ ./GHBFIX.9nEmjZ.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 140 | plumed_assert(jt<n)<<"jtype ="<<jt<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed_master/colvar/../core/../tools/Exception.h:376:34: note: in definition of macro ‘plumed_assert’ 376 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action METAD with label metad : The GRID file you want to read: GRID, cannot be found! [fv-az1341-704:62474] *** Process received signal *** [fv-az1341-704:62474] Signal: Aborted (6) [fv-az1341-704:62474] Signal code: (-6) [fv-az1341-704:62474] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7feaa6645330] [fv-az1341-704:62474] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7feaa669eb2c] [fv-az1341-704:62474] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7feaa664527e] [fv-az1341-704:62474] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7feaa66288ff] [fv-az1341-704:62474] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7feaa6aa5ff5] [fv-az1341-704:62474] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7feaa6abb0da] [fv-az1341-704:62474] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7feaa6aa5a55] [fv-az1341-704:62474] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7feaa6aa5a6f] [fv-az1341-704:62474] [ 8] plumed_master(+0x146dd)[0x55d0871286dd] [fv-az1341-704:62474] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7feaa662a1ca] [fv-az1341-704:62474] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7feaa662a28b] [fv-az1341-704:62474] [11] plumed_master(+0x15365)[0x55d087129365] [fv-az1341-704:62474] *** End of error message ***