Project ID: plumID:22.036
Stderr for source: plumed.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above WARNING: using a legacy ActionRegister.h include path, please use <<#include "core/ActionRegister.h">> WARNING: "core/Atoms.h" does not exist anymore in version >=2.10, you should change your code. In file included from /home/runner/opt/include/plumed/colvar/../core/../tools/Keywords.h:29, from /home/runner/opt/include/plumed/colvar/../core/Action.h:27, from /home/runner/opt/include/plumed/colvar/../core/ActionAtomistic.h:25, from /home/runner/opt/include/plumed/colvar/../core/Colvar.h:25, from /home/runner/opt/include/plumed/colvar/Colvar.h:24, from /home/runner/opt/include/plumed/colvar/CoordinationBase.h:24, from ./GHBFIX.PrcCcu.cpp:22: ./GHBFIX.PrcCcu.cpp: In constructor ‘PLMD::colvar::GHBFIX::GHBFIX(const PLMD::ActionOptions&)’: ./GHBFIX.PrcCcu.cpp:139:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 139 | plumed_assert(it<n)<<"itype ="<<it<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed/colvar/../core/../tools/Exception.h:376:34: note: in definition of macro ‘plumed_assert’ 376 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ ./GHBFIX.PrcCcu.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 140 | plumed_assert(jt<n)<<"jtype ="<<jt<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed/colvar/../core/../tools/Exception.h:376:34: note: in definition of macro ‘plumed_assert’ 376 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action METAD with label metad : The GRID file you want to read: GRID, cannot be found! [runnervmkj6or:06585] *** Process received signal *** [runnervmkj6or:06585] Signal: Aborted (6) [runnervmkj6or:06585] Signal code: (-6) [runnervmkj6or:06585] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f3fa7645330] [runnervmkj6or:06585] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f3fa769eb2c] [runnervmkj6or:06585] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f3fa764527e] [runnervmkj6or:06585] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f3fa76288ff] [runnervmkj6or:06585] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7f3fa7aa5ff5] [runnervmkj6or:06585] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7f3fa7abb0da] [runnervmkj6or:06585] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7f3fa7aa5a55] [runnervmkj6or:06585] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7f3fa7aa5a6f] [runnervmkj6or:06585] [ 8] plumed(+0x146dd)[0x5603b4ca66dd] [runnervmkj6or:06585] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f3fa762a1ca] [runnervmkj6or:06585] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f3fa762a28b] [runnervmkj6or:06585] [11] plumed(+0x15365)[0x5603b4ca7365] [runnervmkj6or:06585] *** End of error message ***