Project ID: plumID:22.021
Source: IceV-Liquid/4-BiasedCoexistence/COEX_4000.0atm/235.0K/plumed.strict.dat
Originally used with PLUMED version: 2.8
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes
tested onv2.10
tested onmaster
# Strict counting of molecules
ENVIRONMENTSIMILARITYMeasure how similar the environment around atoms is to that found in some reference crystal structure. This action is a shortcut and it has hidden defaults. More details ...
 SPECIESthis keyword is used for colvars such as coordination number=1-2016:3
 SIGMA the width to use for the gaussian kernels=0.0725
 CRYSTAL_STRUCTURE Targeted crystal structure=CUSTOM
 LABELa label for the action so that its output can be referenced in the input to other actions=refcv2
 REFERENCE_1PDB files with relative distances from central atom=env1.pdb
 REFERENCE_2PDB files with relative distances from central atom=env2.pdb
 REFERENCE_3PDB files with relative distances from central atom=env3.pdb
 REFERENCE_4PDB files with relative distances from central atom=env4.pdb
 REFERENCE_5PDB files with relative distances from central atom=env5.pdb
 REFERENCE_6PDB files with relative distances from central atom=env6.pdb
 REFERENCE_7PDB files with relative distances from central atom=env7.pdb
 REFERENCE_8PDB files with relative distances from central atom=env8.pdb
 REFERENCE_9PDB files with relative distances from central atom=env9.pdb
 REFERENCE_10PDB files with relative distances from central atom=env10.pdb
 REFERENCE_11PDB files with relative distances from central atom=env11.pdb
 REFERENCE_12PDB files with relative distances from central atom=env12.pdb
 REFERENCE_13PDB files with relative distances from central atom=env13.pdb
 REFERENCE_14PDB files with relative distances from central atom=env14.pdb
 REFERENCE_15PDB files with relative distances from central atom=env15.pdb
 REFERENCE_16PDB files with relative distances from central atom=env16.pdb
 REFERENCE_17PDB files with relative distances from central atom=env17.pdb
 REFERENCE_18PDB files with relative distances from central atom=env18.pdb
 REFERENCE_19PDB files with relative distances from central atom=env19.pdb
 REFERENCE_20PDB files with relative distances from central atom=env20.pdb
 REFERENCE_21PDB files with relative distances from central atom=env21.pdb
 REFERENCE_22PDB files with relative distances from central atom=env22.pdb
 REFERENCE_23PDB files with relative distances from central atom=env23.pdb
 REFERENCE_24PDB files with relative distances from central atom=env24.pdb
 REFERENCE_25PDB files with relative distances from central atom=env25.pdb
 REFERENCE_26PDB files with relative distances from central atom=env26.pdb
 REFERENCE_27PDB files with relative distances from central atom=env27.pdb
 REFERENCE_28PDB files with relative distances from central atom=env28.pdb
 MORE_THANcalculate the number of variables that are more than a certain target value. Options for this keyword are explained in the documentation for MORE_THAN.={CUBIC D_0=0.83000 D_MAX=0.83001}
 MEAN calculate the mean of all the quantities
... ENVIRONMENTSIMILARITY