Project ID: plumID:22.002
Stderr for source: OAH-G1/plumed.dat
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WARNING: using a legacy ActionRegister.h include path, please use <<#include "core/ActionRegister.h">>
WARNING: "core/Atoms.h" does not exist anymore in version >=2.10, you should change your code.
GAMBES_log_static_few.z0KCQW.cpp: In static member function ‘static void PLMD::bias::GAMBESL::registerKeywords(PLMD::Keywords&)’:
GAMBES_log_static_few.z0KCQW.cpp:100:26: warning: ‘void PLMD::Keywords::addOutputComponent(const std::string&, const std::string&, const std::string&)’ is deprecated: Use addOutputComponent with four argument and specify valid types for value from scalar/vector/matrix/grid [-Wdeprecated-declarations]
100 | keys.addOutputComponent("_factors","default","two or more weighing factors for bias"
| ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
101 | "these quantities will named with the gaussian number followed by "
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
102 | "the character string _factors. These quantities tell the user the value of the factor ");
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/runner/opt/include/plumed_master/core/Action.h:28,
from /home/runner/opt/include/plumed_master/core/ActionWithValue.h:25,
from GAMBES_log_static_few.z0KCQW.cpp:23:
/home/runner/opt/include/plumed_master/core/../tools/Keywords.h:268:8: note: declared here
268 | void addOutputComponent( const std::string& name, const std::string& key, const std::string& descr );
| ^~~~~~~~~~~~~~~~~~
GAMBES_log_static_few.z0KCQW.cpp:103:26: warning: ‘void PLMD::Keywords::addOutputComponent(const std::string&, const std::string&, const std::string&)’ is deprecated: Use addOutputComponent with four argument and specify valid types for value from scalar/vector/matrix/grid [-Wdeprecated-declarations]
103 | keys.addOutputComponent("_averages","AVERAGES","two or more the averages");
| ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/runner/opt/include/plumed_master/core/../tools/Keywords.h:268:8: note: declared here
268 | void addOutputComponent( const std::string& name, const std::string& key, const std::string& descr );
| ^~~~~~~~~~~~~~~~~~
GAMBES_log_static_few.z0KCQW.cpp: In member function ‘virtual void PLMD::bias::GAMBESL::prepare()’:
GAMBES_log_static_few.z0KCQW.cpp:232:37: warning: ‘void PLMD::PlumedMain::DeprecatedAtoms::setCollectEnergy(bool) const’ is deprecated [-Wdeprecated-declarations]
232 | plumed.getAtoms().setCollectEnergy(true);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
In file included from GAMBES_log_static_few.z0KCQW.cpp:22:
/home/runner/opt/include/plumed_master/core/PlumedMain.h:111:10: note: declared here
111 | void setCollectEnergy(bool b) const;
| ^~~~~~~~~~~~~~~~
GAMBES_log_static_few.z0KCQW.cpp: In member function ‘virtual void PLMD::bias::GAMBESL::calculate()’:
GAMBES_log_static_few.z0KCQW.cpp:238:36: warning: ‘double PLMD::PlumedMain::DeprecatedAtoms::getKbT() const’ is deprecated: Use Action::getkBT() N.B. this function also reads the TEMP keyword from the input for you. [-Wdeprecated-declarations]
238 | beta = 1/plumed.getAtoms().getKbT();
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/runner/opt/include/plumed_master/core/PlumedMain.h:105:12: note: declared here
105 | double getKbT() const ;
| ^~~~~~
GAMBES_log_static_few.z0KCQW.cpp:239:63: warning: ‘double PLMD::PlumedMain::DeprecatedAtoms::getKBoltzmann() const’ is deprecated: Use Action::getKBoltzmann(). [-Wdeprecated-declarations]
239 | if(temp>0.0){ beta = 1/(temp*plumed.getAtoms().getKBoltzmann()) ; }
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/runner/opt/include/plumed_master/core/PlumedMain.h:103:12: note: declared here
103 | double getKBoltzmann() const ;
| ^~~~~~~~~~~~~
GAMBES_log_static_few.z0KCQW.cpp:258:57: warning: ‘double PLMD::PlumedMain::DeprecatedAtoms::getEnergy() const’ is deprecated [-Wdeprecated-declarations]
258 | if(iter==0){energy_offset= plumed.getAtoms().getEnergy();}
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/runner/opt/include/plumed_master/core/PlumedMain.h:113:12: note: declared here
113 | double getEnergy() const ;
| ^~~~~~~~~
GAMBES_log_static_few.z0KCQW.cpp:259:44: warning: ‘double PLMD::PlumedMain::DeprecatedAtoms::getEnergy() const’ is deprecated [-Wdeprecated-declarations]
259 | double energy=plumed.getAtoms().getEnergy() - energy_offset;
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~
/home/runner/opt/include/plumed_master/core/PlumedMain.h:113:12: note: declared here
113 | double getEnergy() const ;
| ^~~~~~~~~
ERROR : in input for command line tool driver :
(tools/Keywords.cpp:378) void PLMD::Keywords::use(std::string_view)
+++ assertion failed: reserved(k)
the ARG keyword is not reserved