Project ID: plumID:21.033
Stderr for source: outside_path/plumed.10.dat
Download: zipped raw stdout - zipped raw stderr

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WARNING: using a legacy ActionRegister.h include path, please use <<#include "core/ActionRegister.h">>
WARNING: "core/Atoms.h" does not exist anymore in  version >=2.10, you should change your code.
../PathCV.TqCcNh.cpp: In destructor ‘virtual PLMD::function::PathCV::~PathCV()’:
../PathCV.TqCcNh.cpp:208:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
208 |   for(int i=0;i<mw_n_;++i){
|               ~^~~~~~
../PathCV.TqCcNh.cpp: In constructor ‘PLMD::function::PathCV::PathCV(const PLMD::ActionOptions&)’:
../PathCV.TqCcNh.cpp:236:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
236 |   for(int i=0;i<mw_n_;++i){
|               ~^~~~~~
../PathCV.TqCcNh.cpp:259:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
259 |       if(i==mw_id_) ifiles[i]->close();
|          ~^~~~~~~~
../PathCV.TqCcNh.cpp: In member function ‘void PLMD::function::PathCV::generatePath()’:
../PathCV.TqCcNh.cpp:483:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
483 |     for(int inode=0;inode<nnodes;inode++){
|                     ~~~~~^~~~~~~
../PathCV.TqCcNh.cpp: In member function ‘void PLMD::function::PathCV::readMultipleWalkers()’:
../PathCV.TqCcNh.cpp:941:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
941 |   for(int i=0;i<mw_n_;++i){
|               ~^~~~~~
../PathCV.TqCcNh.cpp:942:9: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
942 |     if(i==mw_id_) continue;
|        ~^~~~~~~~
../PathCV.TqCcNh.cpp:957:5: error: invalid use of incomplete type ‘class PLMD::Communicator’
957 |     comm.Barrier();
|     ^~~~
In file included from /home/runner/opt/include/plumed_master/function/../core/../tools/OFile.h:25,
from /home/runner/opt/include/plumed_master/function/../core/../tools/Log.h:25,
from /home/runner/opt/include/plumed_master/function/../core/Action.h:30,
from /home/runner/opt/include/plumed_master/function/../core/ActionWithValue.h:25,
from /home/runner/opt/include/plumed_master/function/Function.h:25,
from ../PathCV.TqCcNh.cpp:22:
/home/runner/opt/include/plumed_master/function/../core/../tools/FileBase.h:29:7: note: forward declaration of ‘class PLMD::Communicator’
29 | class Communicator;
|       ^~~~~~~~~~~~
../PathCV.TqCcNh.cpp:958:5: error: invalid use of incomplete type ‘class PLMD::Communicator’
958 |     multi_sim_comm.Barrier();
|     ^~~~~~~~~~~~~~
In file included from /home/runner/opt/include/plumed_master/function/../core/../tools/OFile.h:25,
from /home/runner/opt/include/plumed_master/function/../core/../tools/Log.h:25,
from /home/runner/opt/include/plumed_master/function/../core/Action.h:30,
from /home/runner/opt/include/plumed_master/function/../core/ActionWithValue.h:25,
from /home/runner/opt/include/plumed_master/function/Function.h:25,
from ../PathCV.TqCcNh.cpp:22:
/home/runner/opt/include/plumed_master/function/../core/../tools/FileBase.h:29:7: note: forward declaration of ‘class PLMD::Communicator’
29 | class Communicator;
|       ^~~~~~~~~~~~
terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError'
what():
(core/PlumedMain.cpp:1260) void PLMD::PlumedMain::load(const string&)
An error happened while executing command env PLUMED_ROOT="/home/runner/opt/lib/plumed_master" env PLUMED_VERSION="2.10.0-dev" env PLUMED_HTMLDIR="/home/runner/opt/share/doc/plumed_master" env PLUMED_INCLUDEDIR="/home/runner/opt/include" env PLUMED_PROGRAM_NAME="plumed_master" env PLUMED_IS_INSTALLED="yes" "/home/runner/opt/lib/plumed_master"/scripts/mklib.sh ../PathCV.cpp

[fv-az1200-632:70729] *** Process received signal ***
[fv-az1200-632:70729] Signal: Aborted (6)
[fv-az1200-632:70729] Signal code:  (-6)
[fv-az1200-632:70729] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7fd221042520]
[fv-az1200-632:70729] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7fd2210969fc]
[fv-az1200-632:70729] [ 2] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7fd221042476]
[fv-az1200-632:70729] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7fd2210287f3]
[fv-az1200-632:70729] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa4f26)[0x7fd2214a4f26]
[fv-az1200-632:70729] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6d9c)[0x7fd2214b6d9c]
[fv-az1200-632:70729] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6e07)[0x7fd2214b6e07]
[fv-az1200-632:70729] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(__cxa_rethrow+0x4b)[0x7fd2214b70bb]
[fv-az1200-632:70729] [ 8] plumed_master(+0x12e7f)[0x55eb10b67e7f]
[fv-az1200-632:70729] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7fd221029d90]
[fv-az1200-632:70729] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7fd221029e40]
[fv-az1200-632:70729] [11] plumed_master(+0x13115)[0x55eb10b68115]
[fv-az1200-632:70729] *** End of error message ***