Project ID: plumID:21.028
Stderr for source: hBromination/unbiased/anti_markovnikov/plumed.dat
Download: zipped raw stdout - zipped raw stderr

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../../Contacts.cpp: In constructor ‘PLMD::colvar::Contacts::Contacts(const PLMD::ActionOptions&)’:
../../Contacts.cpp:93:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
93 |   for(unsigned int i=0; i<num_atomsa; i++)
|                         ~^~~~~~~~~~~
../../Contacts.cpp:99:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
99 |   for(unsigned int i=0; i<num_atomsb; i++)
|                         ~^~~~~~~~~~~
../../Contacts.cpp:124:25: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
124 |   for(unsigned int i=0;i<num_atomsa;++i){
|                        ~^~~~~~~~~~~
../../Contacts.cpp:129:25: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
129 |   for(unsigned int i=0;i<num_atomsb;++i){
|                        ~^~~~~~~~~~~
terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError'
what():
(tools/Keywords.cpp:210) void PLMD::Keywords::addFlag(const string&, bool, const string&)
+++ assertion failed: !def
the second argument to addFlag must be false COMPONENTS
[fv-az1108-992:71476] *** Process received signal ***
[fv-az1108-992:71476] Signal: Aborted (6)
[fv-az1108-992:71476] Signal code:  (-6)
[fv-az1108-992:71476] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f519fa42520]
[fv-az1108-992:71476] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f519fa969fc]
[fv-az1108-992:71476] [ 2] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f519fa42476]
[fv-az1108-992:71476] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f519fa287f3]
[fv-az1108-992:71476] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa4f26)[0x7f519fea4f26]
[fv-az1108-992:71476] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6d9c)[0x7f519feb6d9c]
[fv-az1108-992:71476] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xb6e07)[0x7f519feb6e07]
[fv-az1108-992:71476] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(__cxa_rethrow+0x4b)[0x7f519feb70bb]
[fv-az1108-992:71476] [ 8] plumed(+0x12f48)[0x55c4fb9d7f48]
[fv-az1108-992:71476] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f519fa29d90]
[fv-az1108-992:71476] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f519fa29e40]
[fv-az1108-992:71476] [11] plumed(+0x131e5)[0x55c4fb9d81e5]
[fv-az1108-992:71476] *** End of error message ***