PLUMED-NEST

Project ID: plumID:21.023
Source: Data-ala3/ala3-vacuum-wtm-rct-ustride-50-bf5/plumed.dat
Originally used with PLUMED version: 2.7
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes

# vim:ft=plumedEnables syntax highlighting for PLUMED files in vim. See here for more details. 

energyThe ENERGY action with label energy calculates the following quantities:
 Quantity   
 Type   
 Description  
energy
scalar
the internal energy:  ENERGYCalculate the total potential energy of the simulation box. More details 
phi-1The TORSION action with label phi-1 calculates the following quantities:
 Quantity   
 Type   
 Description  
phi-1
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=5,7,9,15       NOPBC ignore the periodic boundary conditions when calculating distances
psi-1The TORSION action with label psi-1 calculates the following quantities:
 Quantity   
 Type   
 Description  
psi-1
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=7,9,15,17      NOPBC ignore the periodic boundary conditions when calculating distances
phi-2The TORSION action with label phi-2 calculates the following quantities:
 Quantity   
 Type   
 Description  
phi-2
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=15,17,19,25    NOPBC ignore the periodic boundary conditions when calculating distances
psi-2The TORSION action with label psi-2 calculates the following quantities:
 Quantity   
 Type   
 Description  
psi-2
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=17,19,25,27    NOPBC ignore the periodic boundary conditions when calculating distances
phi-3The TORSION action with label phi-3 calculates the following quantities:
 Quantity   
 Type   
 Description  
phi-3
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=25,27,29,35    NOPBC ignore the periodic boundary conditions when calculating distances
psi-3The TORSION action with label psi-3 calculates the following quantities:
 Quantity   
 Type   
 Description  
psi-3
scalar
the TORSION involving these atoms:   TORSIONCalculate one or multiple torsional angles. More details ATOMSthe four atoms involved in the torsional angle=27,29,35,37    NOPBC ignore the periodic boundary conditions when calculating distances

d1The DISTANCE action with label d1 calculates the following quantities:
 Quantity   
 Type   
 Description  
d1
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,5    NOPBC ignore the periodic boundary conditions when calculating distances
d2The DISTANCE action with label d2 calculates the following quantities:
 Quantity   
 Type   
 Description  
d2
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,6    NOPBC ignore the periodic boundary conditions when calculating distances
d3The DISTANCE action with label d3 calculates the following quantities:
 Quantity   
 Type   
 Description  
d3
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,7    NOPBC ignore the periodic boundary conditions when calculating distances
d4The DISTANCE action with label d4 calculates the following quantities:
 Quantity   
 Type   
 Description  
d4
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,9    NOPBC ignore the periodic boundary conditions when calculating distances
d5The DISTANCE action with label d5 calculates the following quantities:
 Quantity   
 Type   
 Description  
d5
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,11    NOPBC ignore the periodic boundary conditions when calculating distances
d6The DISTANCE action with label d6 calculates the following quantities:
 Quantity   
 Type   
 Description  
d6
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,15    NOPBC ignore the periodic boundary conditions when calculating distances
d7The DISTANCE action with label d7 calculates the following quantities:
 Quantity   
 Type   
 Description  
d7
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,16    NOPBC ignore the periodic boundary conditions when calculating distances
d8The DISTANCE action with label d8 calculates the following quantities:
 Quantity   
 Type   
 Description  
d8
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,17    NOPBC ignore the periodic boundary conditions when calculating distances
d9The DISTANCE action with label d9 calculates the following quantities:
 Quantity   
 Type   
 Description  
d9
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,19    NOPBC ignore the periodic boundary conditions when calculating distances
d10The DISTANCE action with label d10 calculates the following quantities:
 Quantity   
 Type   
 Description  
d10
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,21    NOPBC ignore the periodic boundary conditions when calculating distances
d11The DISTANCE action with label d11 calculates the following quantities:
 Quantity   
 Type   
 Description  
d11
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,25    NOPBC ignore the periodic boundary conditions when calculating distances
d12The DISTANCE action with label d12 calculates the following quantities:
 Quantity   
 Type   
 Description  
d12
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,26    NOPBC ignore the periodic boundary conditions when calculating distances
d13The DISTANCE action with label d13 calculates the following quantities:
 Quantity   
 Type   
 Description  
d13
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,27    NOPBC ignore the periodic boundary conditions when calculating distances
d14The DISTANCE action with label d14 calculates the following quantities:
 Quantity   
 Type   
 Description  
d14
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,29    NOPBC ignore the periodic boundary conditions when calculating distances
d15The DISTANCE action with label d15 calculates the following quantities:
 Quantity   
 Type   
 Description  
d15
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,31    NOPBC ignore the periodic boundary conditions when calculating distances
d16The DISTANCE action with label d16 calculates the following quantities:
 Quantity   
 Type   
 Description  
d16
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,35    NOPBC ignore the periodic boundary conditions when calculating distances
d17The DISTANCE action with label d17 calculates the following quantities:
 Quantity   
 Type   
 Description  
d17
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,36    NOPBC ignore the periodic boundary conditions when calculating distances
d18The DISTANCE action with label d18 calculates the following quantities:
 Quantity   
 Type   
 Description  
d18
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,37    NOPBC ignore the periodic boundary conditions when calculating distances
d19The DISTANCE action with label d19 calculates the following quantities:
 Quantity   
 Type   
 Description  
d19
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=1,39    NOPBC ignore the periodic boundary conditions when calculating distances
d20The DISTANCE action with label d20 calculates the following quantities:
 Quantity   
 Type   
 Description  
d20
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,6    NOPBC ignore the periodic boundary conditions when calculating distances
d21The DISTANCE action with label d21 calculates the following quantities:
 Quantity   
 Type   
 Description  
d21
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,7    NOPBC ignore the periodic boundary conditions when calculating distances
d22The DISTANCE action with label d22 calculates the following quantities:
 Quantity   
 Type   
 Description  
d22
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,9    NOPBC ignore the periodic boundary conditions when calculating distances
d23The DISTANCE action with label d23 calculates the following quantities:
 Quantity   
 Type   
 Description  
d23
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,11    NOPBC ignore the periodic boundary conditions when calculating distances
d24The DISTANCE action with label d24 calculates the following quantities:
 Quantity   
 Type   
 Description  
d24
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,15    NOPBC ignore the periodic boundary conditions when calculating distances
d25The DISTANCE action with label d25 calculates the following quantities:
 Quantity   
 Type   
 Description  
d25
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,16    NOPBC ignore the periodic boundary conditions when calculating distances
d26The DISTANCE action with label d26 calculates the following quantities:
 Quantity   
 Type   
 Description  
d26
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,17    NOPBC ignore the periodic boundary conditions when calculating distances
d27The DISTANCE action with label d27 calculates the following quantities:
 Quantity   
 Type   
 Description  
d27
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,19    NOPBC ignore the periodic boundary conditions when calculating distances
d28The DISTANCE action with label d28 calculates the following quantities:
 Quantity   
 Type   
 Description  
d28
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,21    NOPBC ignore the periodic boundary conditions when calculating distances
d29The DISTANCE action with label d29 calculates the following quantities:
 Quantity   
 Type   
 Description  
d29
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,25    NOPBC ignore the periodic boundary conditions when calculating distances
d30The DISTANCE action with label d30 calculates the following quantities:
 Quantity   
 Type   
 Description  
d30
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,26    NOPBC ignore the periodic boundary conditions when calculating distances
d31The DISTANCE action with label d31 calculates the following quantities:
 Quantity   
 Type   
 Description  
d31
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,27    NOPBC ignore the periodic boundary conditions when calculating distances
d32The DISTANCE action with label d32 calculates the following quantities:
 Quantity   
 Type   
 Description  
d32
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,29    NOPBC ignore the periodic boundary conditions when calculating distances
d33The DISTANCE action with label d33 calculates the following quantities:
 Quantity   
 Type   
 Description  
d33
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,31    NOPBC ignore the periodic boundary conditions when calculating distances
d34The DISTANCE action with label d34 calculates the following quantities:
 Quantity   
 Type   
 Description  
d34
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,35    NOPBC ignore the periodic boundary conditions when calculating distances
d35The DISTANCE action with label d35 calculates the following quantities:
 Quantity   
 Type   
 Description  
d35
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,36    NOPBC ignore the periodic boundary conditions when calculating distances
d36The DISTANCE action with label d36 calculates the following quantities:
 Quantity   
 Type   
 Description  
d36
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,37    NOPBC ignore the periodic boundary conditions when calculating distances
d37The DISTANCE action with label d37 calculates the following quantities:
 Quantity   
 Type   
 Description  
d37
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=5,39    NOPBC ignore the periodic boundary conditions when calculating distances
d38The DISTANCE action with label d38 calculates the following quantities:
 Quantity   
 Type   
 Description  
d38
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,7    NOPBC ignore the periodic boundary conditions when calculating distances
d39The DISTANCE action with label d39 calculates the following quantities:
 Quantity   
 Type   
 Description  
d39
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,9    NOPBC ignore the periodic boundary conditions when calculating distances
d40The DISTANCE action with label d40 calculates the following quantities:
 Quantity   
 Type   
 Description  
d40
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,11    NOPBC ignore the periodic boundary conditions when calculating distances
d41The DISTANCE action with label d41 calculates the following quantities:
 Quantity   
 Type   
 Description  
d41
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,15    NOPBC ignore the periodic boundary conditions when calculating distances
d42The DISTANCE action with label d42 calculates the following quantities:
 Quantity   
 Type   
 Description  
d42
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,16    NOPBC ignore the periodic boundary conditions when calculating distances
d43The DISTANCE action with label d43 calculates the following quantities:
 Quantity   
 Type   
 Description  
d43
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,17    NOPBC ignore the periodic boundary conditions when calculating distances
d44The DISTANCE action with label d44 calculates the following quantities:
 Quantity   
 Type   
 Description  
d44
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,19    NOPBC ignore the periodic boundary conditions when calculating distances
d45The DISTANCE action with label d45 calculates the following quantities:
 Quantity   
 Type   
 Description  
d45
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,21    NOPBC ignore the periodic boundary conditions when calculating distances
d46The DISTANCE action with label d46 calculates the following quantities:
 Quantity   
 Type   
 Description  
d46
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,25    NOPBC ignore the periodic boundary conditions when calculating distances
d47The DISTANCE action with label d47 calculates the following quantities:
 Quantity   
 Type   
 Description  
d47
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,26    NOPBC ignore the periodic boundary conditions when calculating distances
d48The DISTANCE action with label d48 calculates the following quantities:
 Quantity   
 Type   
 Description  
d48
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,27    NOPBC ignore the periodic boundary conditions when calculating distances
d49The DISTANCE action with label d49 calculates the following quantities:
 Quantity   
 Type   
 Description  
d49
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,29    NOPBC ignore the periodic boundary conditions when calculating distances
d50The DISTANCE action with label d50 calculates the following quantities:
 Quantity   
 Type   
 Description  
d50
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,31    NOPBC ignore the periodic boundary conditions when calculating distances
d51The DISTANCE action with label d51 calculates the following quantities:
 Quantity   
 Type   
 Description  
d51
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,35    NOPBC ignore the periodic boundary conditions when calculating distances
d52The DISTANCE action with label d52 calculates the following quantities:
 Quantity   
 Type   
 Description  
d52
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,36    NOPBC ignore the periodic boundary conditions when calculating distances
d53The DISTANCE action with label d53 calculates the following quantities:
 Quantity   
 Type   
 Description  
d53
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,37    NOPBC ignore the periodic boundary conditions when calculating distances
d54The DISTANCE action with label d54 calculates the following quantities:
 Quantity   
 Type   
 Description  
d54
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=6,39    NOPBC ignore the periodic boundary conditions when calculating distances
d55The DISTANCE action with label d55 calculates the following quantities:
 Quantity   
 Type   
 Description  
d55
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,9    NOPBC ignore the periodic boundary conditions when calculating distances
d56The DISTANCE action with label d56 calculates the following quantities:
 Quantity   
 Type   
 Description  
d56
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,11    NOPBC ignore the periodic boundary conditions when calculating distances
d57The DISTANCE action with label d57 calculates the following quantities:
 Quantity   
 Type   
 Description  
d57
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,15    NOPBC ignore the periodic boundary conditions when calculating distances
d58The DISTANCE action with label d58 calculates the following quantities:
 Quantity   
 Type   
 Description  
d58
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,16    NOPBC ignore the periodic boundary conditions when calculating distances
d59The DISTANCE action with label d59 calculates the following quantities:
 Quantity   
 Type   
 Description  
d59
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,17    NOPBC ignore the periodic boundary conditions when calculating distances
d60The DISTANCE action with label d60 calculates the following quantities:
 Quantity   
 Type   
 Description  
d60
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,19    NOPBC ignore the periodic boundary conditions when calculating distances
d61The DISTANCE action with label d61 calculates the following quantities:
 Quantity   
 Type   
 Description  
d61
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,21    NOPBC ignore the periodic boundary conditions when calculating distances
d62The DISTANCE action with label d62 calculates the following quantities:
 Quantity   
 Type   
 Description  
d62
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,25    NOPBC ignore the periodic boundary conditions when calculating distances
d63The DISTANCE action with label d63 calculates the following quantities:
 Quantity   
 Type   
 Description  
d63
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,26    NOPBC ignore the periodic boundary conditions when calculating distances
d64The DISTANCE action with label d64 calculates the following quantities:
 Quantity   
 Type   
 Description  
d64
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,27    NOPBC ignore the periodic boundary conditions when calculating distances
d65The DISTANCE action with label d65 calculates the following quantities:
 Quantity   
 Type   
 Description  
d65
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,29    NOPBC ignore the periodic boundary conditions when calculating distances
d66The DISTANCE action with label d66 calculates the following quantities:
 Quantity   
 Type   
 Description  
d66
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,31    NOPBC ignore the periodic boundary conditions when calculating distances
d67The DISTANCE action with label d67 calculates the following quantities:
 Quantity   
 Type   
 Description  
d67
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,35    NOPBC ignore the periodic boundary conditions when calculating distances
d68The DISTANCE action with label d68 calculates the following quantities:
 Quantity   
 Type   
 Description  
d68
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,36    NOPBC ignore the periodic boundary conditions when calculating distances
d69The DISTANCE action with label d69 calculates the following quantities:
 Quantity   
 Type   
 Description  
d69
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,37    NOPBC ignore the periodic boundary conditions when calculating distances
d70The DISTANCE action with label d70 calculates the following quantities:
 Quantity   
 Type   
 Description  
d70
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=7,39    NOPBC ignore the periodic boundary conditions when calculating distances
d71The DISTANCE action with label d71 calculates the following quantities:
 Quantity   
 Type   
 Description  
d71
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,11    NOPBC ignore the periodic boundary conditions when calculating distances
d72The DISTANCE action with label d72 calculates the following quantities:
 Quantity   
 Type   
 Description  
d72
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,15    NOPBC ignore the periodic boundary conditions when calculating distances
d73The DISTANCE action with label d73 calculates the following quantities:
 Quantity   
 Type   
 Description  
d73
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,16    NOPBC ignore the periodic boundary conditions when calculating distances
d74The DISTANCE action with label d74 calculates the following quantities:
 Quantity   
 Type   
 Description  
d74
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,17    NOPBC ignore the periodic boundary conditions when calculating distances
d75The DISTANCE action with label d75 calculates the following quantities:
 Quantity   
 Type   
 Description  
d75
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,19    NOPBC ignore the periodic boundary conditions when calculating distances
d76The DISTANCE action with label d76 calculates the following quantities:
 Quantity   
 Type   
 Description  
d76
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,21    NOPBC ignore the periodic boundary conditions when calculating distances
d77The DISTANCE action with label d77 calculates the following quantities:
 Quantity   
 Type   
 Description  
d77
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,25    NOPBC ignore the periodic boundary conditions when calculating distances
d78The DISTANCE action with label d78 calculates the following quantities:
 Quantity   
 Type   
 Description  
d78
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,26    NOPBC ignore the periodic boundary conditions when calculating distances
d79The DISTANCE action with label d79 calculates the following quantities:
 Quantity   
 Type   
 Description  
d79
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,27    NOPBC ignore the periodic boundary conditions when calculating distances
d80The DISTANCE action with label d80 calculates the following quantities:
 Quantity   
 Type   
 Description  
d80
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,29    NOPBC ignore the periodic boundary conditions when calculating distances
d81The DISTANCE action with label d81 calculates the following quantities:
 Quantity   
 Type   
 Description  
d81
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,31    NOPBC ignore the periodic boundary conditions when calculating distances
d82The DISTANCE action with label d82 calculates the following quantities:
 Quantity   
 Type   
 Description  
d82
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,35    NOPBC ignore the periodic boundary conditions when calculating distances
d83The DISTANCE action with label d83 calculates the following quantities:
 Quantity   
 Type   
 Description  
d83
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,36    NOPBC ignore the periodic boundary conditions when calculating distances
d84The DISTANCE action with label d84 calculates the following quantities:
 Quantity   
 Type   
 Description  
d84
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,37    NOPBC ignore the periodic boundary conditions when calculating distances
d85The DISTANCE action with label d85 calculates the following quantities:
 Quantity   
 Type   
 Description  
d85
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=9,39    NOPBC ignore the periodic boundary conditions when calculating distances
d86The DISTANCE action with label d86 calculates the following quantities:
 Quantity   
 Type   
 Description  
d86
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,15    NOPBC ignore the periodic boundary conditions when calculating distances
d87The DISTANCE action with label d87 calculates the following quantities:
 Quantity   
 Type   
 Description  
d87
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,16    NOPBC ignore the periodic boundary conditions when calculating distances
d88The DISTANCE action with label d88 calculates the following quantities:
 Quantity   
 Type   
 Description  
d88
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,17    NOPBC ignore the periodic boundary conditions when calculating distances
d89The DISTANCE action with label d89 calculates the following quantities:
 Quantity   
 Type   
 Description  
d89
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,19    NOPBC ignore the periodic boundary conditions when calculating distances
d90The DISTANCE action with label d90 calculates the following quantities:
 Quantity   
 Type   
 Description  
d90
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,21    NOPBC ignore the periodic boundary conditions when calculating distances
d91The DISTANCE action with label d91 calculates the following quantities:
 Quantity   
 Type   
 Description  
d91
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,25    NOPBC ignore the periodic boundary conditions when calculating distances
d92The DISTANCE action with label d92 calculates the following quantities:
 Quantity   
 Type   
 Description  
d92
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,26    NOPBC ignore the periodic boundary conditions when calculating distances
d93The DISTANCE action with label d93 calculates the following quantities:
 Quantity   
 Type   
 Description  
d93
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,27    NOPBC ignore the periodic boundary conditions when calculating distances
d94The DISTANCE action with label d94 calculates the following quantities:
 Quantity   
 Type   
 Description  
d94
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,29    NOPBC ignore the periodic boundary conditions when calculating distances
d95The DISTANCE action with label d95 calculates the following quantities:
 Quantity   
 Type   
 Description  
d95
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,31    NOPBC ignore the periodic boundary conditions when calculating distances
d96The DISTANCE action with label d96 calculates the following quantities:
 Quantity   
 Type   
 Description  
d96
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,35    NOPBC ignore the periodic boundary conditions when calculating distances
d97The DISTANCE action with label d97 calculates the following quantities:
 Quantity   
 Type   
 Description  
d97
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,36    NOPBC ignore the periodic boundary conditions when calculating distances
d98The DISTANCE action with label d98 calculates the following quantities:
 Quantity   
 Type   
 Description  
d98
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,37    NOPBC ignore the periodic boundary conditions when calculating distances
d99The DISTANCE action with label d99 calculates the following quantities:
 Quantity   
 Type   
 Description  
d99
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=11,39    NOPBC ignore the periodic boundary conditions when calculating distances
d100The DISTANCE action with label d100 calculates the following quantities:
 Quantity   
 Type   
 Description  
d100
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,16    NOPBC ignore the periodic boundary conditions when calculating distances
d101The DISTANCE action with label d101 calculates the following quantities:
 Quantity   
 Type   
 Description  
d101
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,17    NOPBC ignore the periodic boundary conditions when calculating distances
d102The DISTANCE action with label d102 calculates the following quantities:
 Quantity   
 Type   
 Description  
d102
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,19    NOPBC ignore the periodic boundary conditions when calculating distances
d103The DISTANCE action with label d103 calculates the following quantities:
 Quantity   
 Type   
 Description  
d103
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,21    NOPBC ignore the periodic boundary conditions when calculating distances
d104The DISTANCE action with label d104 calculates the following quantities:
 Quantity   
 Type   
 Description  
d104
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,25    NOPBC ignore the periodic boundary conditions when calculating distances
d105The DISTANCE action with label d105 calculates the following quantities:
 Quantity   
 Type   
 Description  
d105
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,26    NOPBC ignore the periodic boundary conditions when calculating distances
d106The DISTANCE action with label d106 calculates the following quantities:
 Quantity   
 Type   
 Description  
d106
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,27    NOPBC ignore the periodic boundary conditions when calculating distances
d107The DISTANCE action with label d107 calculates the following quantities:
 Quantity   
 Type   
 Description  
d107
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,29    NOPBC ignore the periodic boundary conditions when calculating distances
d108The DISTANCE action with label d108 calculates the following quantities:
 Quantity   
 Type   
 Description  
d108
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,31    NOPBC ignore the periodic boundary conditions when calculating distances
d109The DISTANCE action with label d109 calculates the following quantities:
 Quantity   
 Type   
 Description  
d109
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,35    NOPBC ignore the periodic boundary conditions when calculating distances
d110The DISTANCE action with label d110 calculates the following quantities:
 Quantity   
 Type   
 Description  
d110
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,36    NOPBC ignore the periodic boundary conditions when calculating distances
d111The DISTANCE action with label d111 calculates the following quantities:
 Quantity   
 Type   
 Description  
d111
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,37    NOPBC ignore the periodic boundary conditions when calculating distances
d112The DISTANCE action with label d112 calculates the following quantities:
 Quantity   
 Type   
 Description  
d112
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=15,39    NOPBC ignore the periodic boundary conditions when calculating distances
d113The DISTANCE action with label d113 calculates the following quantities:
 Quantity   
 Type   
 Description  
d113
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,17    NOPBC ignore the periodic boundary conditions when calculating distances
d114The DISTANCE action with label d114 calculates the following quantities:
 Quantity   
 Type   
 Description  
d114
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,19    NOPBC ignore the periodic boundary conditions when calculating distances
d115The DISTANCE action with label d115 calculates the following quantities:
 Quantity   
 Type   
 Description  
d115
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,21    NOPBC ignore the periodic boundary conditions when calculating distances
d116The DISTANCE action with label d116 calculates the following quantities:
 Quantity   
 Type   
 Description  
d116
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,25    NOPBC ignore the periodic boundary conditions when calculating distances
d117The DISTANCE action with label d117 calculates the following quantities:
 Quantity   
 Type   
 Description  
d117
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,26    NOPBC ignore the periodic boundary conditions when calculating distances
d118The DISTANCE action with label d118 calculates the following quantities:
 Quantity   
 Type   
 Description  
d118
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,27    NOPBC ignore the periodic boundary conditions when calculating distances
d119The DISTANCE action with label d119 calculates the following quantities:
 Quantity   
 Type   
 Description  
d119
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,29    NOPBC ignore the periodic boundary conditions when calculating distances
d120The DISTANCE action with label d120 calculates the following quantities:
 Quantity   
 Type   
 Description  
d120
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,31    NOPBC ignore the periodic boundary conditions when calculating distances
d121The DISTANCE action with label d121 calculates the following quantities:
 Quantity   
 Type   
 Description  
d121
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,35    NOPBC ignore the periodic boundary conditions when calculating distances
d122The DISTANCE action with label d122 calculates the following quantities:
 Quantity   
 Type   
 Description  
d122
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,36    NOPBC ignore the periodic boundary conditions when calculating distances
d123The DISTANCE action with label d123 calculates the following quantities:
 Quantity   
 Type   
 Description  
d123
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,37    NOPBC ignore the periodic boundary conditions when calculating distances
d124The DISTANCE action with label d124 calculates the following quantities:
 Quantity   
 Type   
 Description  
d124
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=16,39    NOPBC ignore the periodic boundary conditions when calculating distances
d125The DISTANCE action with label d125 calculates the following quantities:
 Quantity   
 Type   
 Description  
d125
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,19    NOPBC ignore the periodic boundary conditions when calculating distances
d126The DISTANCE action with label d126 calculates the following quantities:
 Quantity   
 Type   
 Description  
d126
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,21    NOPBC ignore the periodic boundary conditions when calculating distances
d127The DISTANCE action with label d127 calculates the following quantities:
 Quantity   
 Type   
 Description  
d127
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,25    NOPBC ignore the periodic boundary conditions when calculating distances
d128The DISTANCE action with label d128 calculates the following quantities:
 Quantity   
 Type   
 Description  
d128
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,26    NOPBC ignore the periodic boundary conditions when calculating distances
d129The DISTANCE action with label d129 calculates the following quantities:
 Quantity   
 Type   
 Description  
d129
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,27    NOPBC ignore the periodic boundary conditions when calculating distances
d130The DISTANCE action with label d130 calculates the following quantities:
 Quantity   
 Type   
 Description  
d130
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,29    NOPBC ignore the periodic boundary conditions when calculating distances
d131The DISTANCE action with label d131 calculates the following quantities:
 Quantity   
 Type   
 Description  
d131
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,31    NOPBC ignore the periodic boundary conditions when calculating distances
d132The DISTANCE action with label d132 calculates the following quantities:
 Quantity   
 Type   
 Description  
d132
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,35    NOPBC ignore the periodic boundary conditions when calculating distances
d133The DISTANCE action with label d133 calculates the following quantities:
 Quantity   
 Type   
 Description  
d133
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,36    NOPBC ignore the periodic boundary conditions when calculating distances
d134The DISTANCE action with label d134 calculates the following quantities:
 Quantity   
 Type   
 Description  
d134
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,37    NOPBC ignore the periodic boundary conditions when calculating distances
d135The DISTANCE action with label d135 calculates the following quantities:
 Quantity   
 Type   
 Description  
d135
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=17,39    NOPBC ignore the periodic boundary conditions when calculating distances
d136The DISTANCE action with label d136 calculates the following quantities:
 Quantity   
 Type   
 Description  
d136
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,21    NOPBC ignore the periodic boundary conditions when calculating distances
d137The DISTANCE action with label d137 calculates the following quantities:
 Quantity   
 Type   
 Description  
d137
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,25    NOPBC ignore the periodic boundary conditions when calculating distances
d138The DISTANCE action with label d138 calculates the following quantities:
 Quantity   
 Type   
 Description  
d138
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,26    NOPBC ignore the periodic boundary conditions when calculating distances
d139The DISTANCE action with label d139 calculates the following quantities:
 Quantity   
 Type   
 Description  
d139
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,27    NOPBC ignore the periodic boundary conditions when calculating distances
d140The DISTANCE action with label d140 calculates the following quantities:
 Quantity   
 Type   
 Description  
d140
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,29    NOPBC ignore the periodic boundary conditions when calculating distances
d141The DISTANCE action with label d141 calculates the following quantities:
 Quantity   
 Type   
 Description  
d141
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,31    NOPBC ignore the periodic boundary conditions when calculating distances
d142The DISTANCE action with label d142 calculates the following quantities:
 Quantity   
 Type   
 Description  
d142
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,35    NOPBC ignore the periodic boundary conditions when calculating distances
d143The DISTANCE action with label d143 calculates the following quantities:
 Quantity   
 Type   
 Description  
d143
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,36    NOPBC ignore the periodic boundary conditions when calculating distances
d144The DISTANCE action with label d144 calculates the following quantities:
 Quantity   
 Type   
 Description  
d144
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,37    NOPBC ignore the periodic boundary conditions when calculating distances
d145The DISTANCE action with label d145 calculates the following quantities:
 Quantity   
 Type   
 Description  
d145
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=19,39    NOPBC ignore the periodic boundary conditions when calculating distances
d146The DISTANCE action with label d146 calculates the following quantities:
 Quantity   
 Type   
 Description  
d146
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,25    NOPBC ignore the periodic boundary conditions when calculating distances
d147The DISTANCE action with label d147 calculates the following quantities:
 Quantity   
 Type   
 Description  
d147
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,26    NOPBC ignore the periodic boundary conditions when calculating distances
d148The DISTANCE action with label d148 calculates the following quantities:
 Quantity   
 Type   
 Description  
d148
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,27    NOPBC ignore the periodic boundary conditions when calculating distances
d149The DISTANCE action with label d149 calculates the following quantities:
 Quantity   
 Type   
 Description  
d149
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,29    NOPBC ignore the periodic boundary conditions when calculating distances
d150The DISTANCE action with label d150 calculates the following quantities:
 Quantity   
 Type   
 Description  
d150
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,31    NOPBC ignore the periodic boundary conditions when calculating distances
d151The DISTANCE action with label d151 calculates the following quantities:
 Quantity   
 Type   
 Description  
d151
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,35    NOPBC ignore the periodic boundary conditions when calculating distances
d152The DISTANCE action with label d152 calculates the following quantities:
 Quantity   
 Type   
 Description  
d152
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,36    NOPBC ignore the periodic boundary conditions when calculating distances
d153The DISTANCE action with label d153 calculates the following quantities:
 Quantity   
 Type   
 Description  
d153
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,37    NOPBC ignore the periodic boundary conditions when calculating distances
d154The DISTANCE action with label d154 calculates the following quantities:
 Quantity   
 Type   
 Description  
d154
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=21,39    NOPBC ignore the periodic boundary conditions when calculating distances
d155The DISTANCE action with label d155 calculates the following quantities:
 Quantity   
 Type   
 Description  
d155
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,26    NOPBC ignore the periodic boundary conditions when calculating distances
d156The DISTANCE action with label d156 calculates the following quantities:
 Quantity   
 Type   
 Description  
d156
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,27    NOPBC ignore the periodic boundary conditions when calculating distances
d157The DISTANCE action with label d157 calculates the following quantities:
 Quantity   
 Type   
 Description  
d157
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,29    NOPBC ignore the periodic boundary conditions when calculating distances
d158The DISTANCE action with label d158 calculates the following quantities:
 Quantity   
 Type   
 Description  
d158
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,31    NOPBC ignore the periodic boundary conditions when calculating distances
d159The DISTANCE action with label d159 calculates the following quantities:
 Quantity   
 Type   
 Description  
d159
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,35    NOPBC ignore the periodic boundary conditions when calculating distances
d160The DISTANCE action with label d160 calculates the following quantities:
 Quantity   
 Type   
 Description  
d160
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,36    NOPBC ignore the periodic boundary conditions when calculating distances
d161The DISTANCE action with label d161 calculates the following quantities:
 Quantity   
 Type   
 Description  
d161
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,37    NOPBC ignore the periodic boundary conditions when calculating distances
d162The DISTANCE action with label d162 calculates the following quantities:
 Quantity   
 Type   
 Description  
d162
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=25,39    NOPBC ignore the periodic boundary conditions when calculating distances
d163The DISTANCE action with label d163 calculates the following quantities:
 Quantity   
 Type   
 Description  
d163
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,27    NOPBC ignore the periodic boundary conditions when calculating distances
d164The DISTANCE action with label d164 calculates the following quantities:
 Quantity   
 Type   
 Description  
d164
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,29    NOPBC ignore the periodic boundary conditions when calculating distances
d165The DISTANCE action with label d165 calculates the following quantities:
 Quantity   
 Type   
 Description  
d165
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,31    NOPBC ignore the periodic boundary conditions when calculating distances
d166The DISTANCE action with label d166 calculates the following quantities:
 Quantity   
 Type   
 Description  
d166
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,35    NOPBC ignore the periodic boundary conditions when calculating distances
d167The DISTANCE action with label d167 calculates the following quantities:
 Quantity   
 Type   
 Description  
d167
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,36    NOPBC ignore the periodic boundary conditions when calculating distances
d168The DISTANCE action with label d168 calculates the following quantities:
 Quantity   
 Type   
 Description  
d168
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,37    NOPBC ignore the periodic boundary conditions when calculating distances
d169The DISTANCE action with label d169 calculates the following quantities:
 Quantity   
 Type   
 Description  
d169
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=26,39    NOPBC ignore the periodic boundary conditions when calculating distances
d170The DISTANCE action with label d170 calculates the following quantities:
 Quantity   
 Type   
 Description  
d170
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,29    NOPBC ignore the periodic boundary conditions when calculating distances
d171The DISTANCE action with label d171 calculates the following quantities:
 Quantity   
 Type   
 Description  
d171
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,31    NOPBC ignore the periodic boundary conditions when calculating distances
d172The DISTANCE action with label d172 calculates the following quantities:
 Quantity   
 Type   
 Description  
d172
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,35    NOPBC ignore the periodic boundary conditions when calculating distances
d173The DISTANCE action with label d173 calculates the following quantities:
 Quantity   
 Type   
 Description  
d173
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,36    NOPBC ignore the periodic boundary conditions when calculating distances
d174The DISTANCE action with label d174 calculates the following quantities:
 Quantity   
 Type   
 Description  
d174
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,37    NOPBC ignore the periodic boundary conditions when calculating distances
d175The DISTANCE action with label d175 calculates the following quantities:
 Quantity   
 Type   
 Description  
d175
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=27,39    NOPBC ignore the periodic boundary conditions when calculating distances
d176The DISTANCE action with label d176 calculates the following quantities:
 Quantity   
 Type   
 Description  
d176
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=29,31    NOPBC ignore the periodic boundary conditions when calculating distances
d177The DISTANCE action with label d177 calculates the following quantities:
 Quantity   
 Type   
 Description  
d177
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=29,35    NOPBC ignore the periodic boundary conditions when calculating distances
d178The DISTANCE action with label d178 calculates the following quantities:
 Quantity   
 Type   
 Description  
d178
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=29,36    NOPBC ignore the periodic boundary conditions when calculating distances
d179The DISTANCE action with label d179 calculates the following quantities:
 Quantity   
 Type   
 Description  
d179
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=29,37    NOPBC ignore the periodic boundary conditions when calculating distances
d180The DISTANCE action with label d180 calculates the following quantities:
 Quantity   
 Type   
 Description  
d180
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=29,39    NOPBC ignore the periodic boundary conditions when calculating distances
d181The DISTANCE action with label d181 calculates the following quantities:
 Quantity   
 Type   
 Description  
d181
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=31,35    NOPBC ignore the periodic boundary conditions when calculating distances
d182The DISTANCE action with label d182 calculates the following quantities:
 Quantity   
 Type   
 Description  
d182
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=31,36    NOPBC ignore the periodic boundary conditions when calculating distances
d183The DISTANCE action with label d183 calculates the following quantities:
 Quantity   
 Type   
 Description  
d183
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=31,37    NOPBC ignore the periodic boundary conditions when calculating distances
d184The DISTANCE action with label d184 calculates the following quantities:
 Quantity   
 Type   
 Description  
d184
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=31,39    NOPBC ignore the periodic boundary conditions when calculating distances
d185The DISTANCE action with label d185 calculates the following quantities:
 Quantity   
 Type   
 Description  
d185
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=35,36    NOPBC ignore the periodic boundary conditions when calculating distances
d186The DISTANCE action with label d186 calculates the following quantities:
 Quantity   
 Type   
 Description  
d186
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=35,37    NOPBC ignore the periodic boundary conditions when calculating distances
d187The DISTANCE action with label d187 calculates the following quantities:
 Quantity   
 Type   
 Description  
d187
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=35,39    NOPBC ignore the periodic boundary conditions when calculating distances
d188The DISTANCE action with label d188 calculates the following quantities:
 Quantity   
 Type   
 Description  
d188
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=36,37    NOPBC ignore the periodic boundary conditions when calculating distances
d189The DISTANCE action with label d189 calculates the following quantities:
 Quantity   
 Type   
 Description  
d189
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=36,39    NOPBC ignore the periodic boundary conditions when calculating distances
d190The DISTANCE action with label d190 calculates the following quantities:
 Quantity   
 Type   
 Description  
d190
scalar
the DISTANCE between this pair of atoms:   DISTANCECalculate the distance/s between pairs of atoms. More details ATOMSthe pair of atom that we are calculating the distance between=37,39    NOPBC ignore the periodic boundary conditions when calculating distances

METADUsed to performed metadynamics on one or more collective variables. This action has hidden defaults. More details ...
  LABELa label for the action so that its output can be referenced in the input to other actions=mtdThe METAD action with label mtd calculates the following quantities:
 Quantity   
 Type   
 Description  
mtd.bias
scalar
the instantaneous value of the bias potential
mtd.rbias
scalar
the instantaneous value of the bias normalized using the c(t) reweighting factor [rbias=bias-rct].This component can be used to obtain a reweighted histogram.
mtd.rct
scalar
the reweighting factor c(t).

  ARGthe labels of the scalars on which the bias will act=phi-1,phi-2,phi-3
  PACEthe frequency for hill addition=500
  SIGMAthe widths of the Gaussian hills=0.2,0.2,0.2
  HEIGHTthe heights of the Gaussian hills=1.2

  BIASFACTORuse well tempered metadynamics and use this bias factor=5
  GRID_MINthe lower bounds for the grid=-pi,-pi,-pi
  GRID_MAXthe upper bounds for the grid=pi,pi,pi
  GRID_BINthe number of bins for the grid=200,200,200
  CALC_RCT calculate the c(t) reweighting factor and use that to obtain the normalized bias [rbias=bias-rct]
  RCT_USTRIDEthe update stride for calculating the c(t) reweighting factor=50
... METAD
METADUsed to performed metadynamics on one or more collective variables. This action uses the defaults shown here. More details ...
  LABELa label for the action so that its output can be referenced in the input to other actions=mtd

  ARGthe labels of the scalars on which the bias will act=phi-1,phi-2,phi-3
  PACEthe frequency for hill addition=500
  SIGMAthe widths of the Gaussian hills=0.2,0.2,0.2
  HEIGHTthe heights of the Gaussian hills=1.2

  BIASFACTORuse well tempered metadynamics and use this bias factor=5
  GRID_MINthe lower bounds for the grid=-pi,-pi,-pi
  GRID_MAXthe upper bounds for the grid=pi,pi,pi
  GRID_BINthe number of bins for the grid=200,200,200
  CALC_RCT calculate the c(t) reweighting factor and use that to obtain the normalized bias [rbias=bias-rct]
  RCT_USTRIDEthe update stride for calculating the c(t) reweighting factor=50
 FILE a file in which the list of added hills is stored=HILLS
... METAD

PRINTPrint quantities to a file. More details ...
  ARGthe labels of the values that you would like to print to the file=*
  STRIDE the frequency with which the quantities of interest should be output=500
  FILEthe name of the file on which to output these quantities=colvar.data
... PRINT