Project ID: plumID:21.015
Source: MetaD/CBM73/post_processing/coordination-groups.dat
Originally used with PLUMED version: 2.5
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes
tested onv2.10
tested onmaster
RESTARTActivate restart. More details
WHOLEMOLECULESThis action is used to rebuild molecules that can become split by the periodic boundary conditions. More details ENTITY0the atoms that make up a molecule that you wish to align=721-882

C1: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=721-722 R_0The r_0 parameter of the switching function=0.3
C2: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=723-723 R_0The r_0 parameter of the switching function=0.3
C3: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=724-725 R_0The r_0 parameter of the switching function=0.3
C4: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=726-727 R_0The r_0 parameter of the switching function=0.3
C5: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=728-729 R_0The r_0 parameter of the switching function=0.3
C6: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=730-731 R_0The r_0 parameter of the switching function=0.3
C7: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=732-733 R_0The r_0 parameter of the switching function=0.3
C8: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=734-735 R_0The r_0 parameter of the switching function=0.3
C9: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=736-740 R_0The r_0 parameter of the switching function=0.3
C10: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=741-742 R_0The r_0 parameter of the switching function=0.3
C11: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=743-744 R_0The r_0 parameter of the switching function=0.3
C12: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=745-745 R_0The r_0 parameter of the switching function=0.3
C13: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=746-747 R_0The r_0 parameter of the switching function=0.3
C14: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=748-749 R_0The r_0 parameter of the switching function=0.3
C15: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=750-754 R_0The r_0 parameter of the switching function=0.3
C16: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=755-755 R_0The r_0 parameter of the switching function=0.3
C17: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=756-757 R_0The r_0 parameter of the switching function=0.3
C18: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=758-759 R_0The r_0 parameter of the switching function=0.3
C19: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=760-760 R_0The r_0 parameter of the switching function=0.3
C20: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=761-762 R_0The r_0 parameter of the switching function=0.3
C21: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=763-764 R_0The r_0 parameter of the switching function=0.3
C22: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=765-766 R_0The r_0 parameter of the switching function=0.3
C23: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=767-768 R_0The r_0 parameter of the switching function=0.3
C24: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=769-770 R_0The r_0 parameter of the switching function=0.3
C25: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=771-771 R_0The r_0 parameter of the switching function=0.3
C26: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=772-773 R_0The r_0 parameter of the switching function=0.3
C27: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=774-775 R_0The r_0 parameter of the switching function=0.3
C28: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=776-780 R_0The r_0 parameter of the switching function=0.3
C29: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=781-783 R_0The r_0 parameter of the switching function=0.3
C30: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=784-785 R_0The r_0 parameter of the switching function=0.3
C31: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=786-787 R_0The r_0 parameter of the switching function=0.3
C32: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=788-789 R_0The r_0 parameter of the switching function=0.3
C33: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=790-790 R_0The r_0 parameter of the switching function=0.3
C34: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=791-791 R_0The r_0 parameter of the switching function=0.3
C35: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=792-797 R_0The r_0 parameter of the switching function=0.3
C36: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=798-799 R_0The r_0 parameter of the switching function=0.3
C37: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=800-801 R_0The r_0 parameter of the switching function=0.3
C38: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=802-803 R_0The r_0 parameter of the switching function=0.3
C39: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=804-804 R_0The r_0 parameter of the switching function=0.3
C40: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=805-805 R_0The r_0 parameter of the switching function=0.3
C41: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=806-807 R_0The r_0 parameter of the switching function=0.3
C42: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=808-812 R_0The r_0 parameter of the switching function=0.3
C43: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=813-813 R_0The r_0 parameter of the switching function=0.3
C44: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=814-815 R_0The r_0 parameter of the switching function=0.3
C45: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=816-816 R_0The r_0 parameter of the switching function=0.3
C46: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=817-818 R_0The r_0 parameter of the switching function=0.3
C47: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=819-819 R_0The r_0 parameter of the switching function=0.3
C48: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=820-825 R_0The r_0 parameter of the switching function=0.3
C49: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=826-826 R_0The r_0 parameter of the switching function=0.3
C50: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=827-832 R_0The r_0 parameter of the switching function=0.3
C51: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=833-833 R_0The r_0 parameter of the switching function=0.3
C52: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=834-835 R_0The r_0 parameter of the switching function=0.3
C53: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=836-836 R_0The r_0 parameter of the switching function=0.3
C54: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=837-842 R_0The r_0 parameter of the switching function=0.3
C55: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=843-844 R_0The r_0 parameter of the switching function=0.3
C56: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=845-846 R_0The r_0 parameter of the switching function=0.3
C57: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=847-848 R_0The r_0 parameter of the switching function=0.3
C58: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=849-851 R_0The r_0 parameter of the switching function=0.3
C59: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=852-853 R_0The r_0 parameter of the switching function=0.3
C60: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=854-855 R_0The r_0 parameter of the switching function=0.3
C61: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=856-857 R_0The r_0 parameter of the switching function=0.3
C62: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=858-858 R_0The r_0 parameter of the switching function=0.3
C63: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=859-862 R_0The r_0 parameter of the switching function=0.3
C64: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=863-866 R_0The r_0 parameter of the switching function=0.3
C65: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=867-870 R_0The r_0 parameter of the switching function=0.3
C66: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=871-874 R_0The r_0 parameter of the switching function=0.3
C67: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=875-878 R_0The r_0 parameter of the switching function=0.3
C68: COORDINATIONCalculate coordination numbers. This action has hidden defaults. More details GROUPAFirst list of atoms=1-720 GROUPBSecond list of atoms (if empty, N*(N-1)/2 pairs in GROUPA are counted)=879-882 R_0The r_0 parameter of the switching function=0.3

PRINTPrint quantities to a file. More details ARGthe labels of the values that you would like to print to the file=* STRIDE the frequency with which the quantities of interest should be output=1 FILEthe name of the file on which to output these quantities=COORDINATION RESTARTallows per-action setting of restart (YES/NO/AUTO)=NO