Project ID: plumID:21.009
Stderr for source: npt-fes/plumed.inp
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above In file included from /home/runner/opt/include/plumed_master/bias/../core/../tools/Tools.h:27, from /home/runner/opt/include/plumed_master/bias/../core/Action.h:28, from /home/runner/opt/include/plumed_master/bias/../core/ActionWithValue.h:25, from /home/runner/opt/include/plumed_master/bias/ReweightBase.h:25, from ../codes/ReweightGeomFES.zrEN5H.cpp:22: /home/runner/opt/include/plumed_master/bias/../core/../tools/Tensor.h:98: warning: ignoring ‘#pragma acc enter’ [-Wunknown-pragmas] 98 | #pragma acc enter data copyin(this[0:1], d, d[0:n*m-1]) | /home/runner/opt/include/plumed_master/bias/../core/../tools/Tensor.h:102: warning: ignoring ‘#pragma acc exit’ [-Wunknown-pragmas] 102 | #pragma acc exit data delete( d[0:n*m-1], d, this[0:1]) | In file included from ../codes/ReweightGeomFES.zrEN5H.cpp:24: /home/runner/opt/include/plumed_master/tools/Matrix.h:100: warning: ignoring ‘#pragma acc enter’ [-Wunknown-pragmas] 100 | #pragma acc enter data copyin(this[0:1],sz,data[0:sz]) | /home/runner/opt/include/plumed_master/tools/Matrix.h:103: warning: ignoring ‘#pragma acc exit’ [-Wunknown-pragmas] 103 | #pragma acc exit data delete(data[0:sz],sz,this[0:1]) | /home/runner/opt/include/plumed_master/tools/Matrix.h:117: warning: ignoring ‘#pragma acc enter’ [-Wunknown-pragmas] 117 | #pragma acc enter data copyin(this[0:1]) | /home/runner/opt/include/plumed_master/tools/Matrix.h:123: warning: ignoring ‘#pragma acc exit’ [-Wunknown-pragmas] 123 | #pragma acc exit data delete( this[0:1]) | Assembler messages: Fatal error: can't create plumed_mklib.4FDHMD/../codes/ReweightGeomFES.o: No such file or directory terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/PlumedMain.cpp:1502) void PLMD::PlumedMain::load(const std::string&) An error happened while executing command env PLUMED_ROOT='/home/runner/opt/lib/plumed_master' PLUMED_VERSION='2.11.0-dev' PLUMED_HTMLDIR='/home/runner/opt/share/doc/plumed_master' PLUMED_INCLUDEDIR='/home/runner/opt/include' PLUMED_PROGRAM_NAME='plumed_master' PLUMED_IS_INSTALLED='yes' "/home/runner/opt/lib/plumed_master"/scripts/mklib.sh -n -o ./../codes/ReweightGeomFES.2.11.0-dev.so ../codes/ReweightGeomFES.cpp [runnervmf4ws1:67879] *** Process received signal *** [runnervmf4ws1:67879] Signal: Aborted (6) [runnervmf4ws1:67879] Signal code: (-6) [runnervmf4ws1:67879] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f0c33245330] [runnervmf4ws1:67879] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f0c3329eb2c] [runnervmf4ws1:67879] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f0c3324527e] [runnervmf4ws1:67879] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f0c332288ff] [runnervmf4ws1:67879] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7f0c336a5ff5] [runnervmf4ws1:67879] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7f0c336bb0da] [runnervmf4ws1:67879] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7f0c336a5a55] [runnervmf4ws1:67879] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7f0c336a5a6f] [runnervmf4ws1:67879] [ 8] plumed_master(+0x146dd)[0x5562fe1696dd] [runnervmf4ws1:67879] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f0c3322a1ca] [runnervmf4ws1:67879] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f0c3322a28b] [runnervmf4ws1:67879] [11] plumed_master(+0x15365)[0x5562fe16a365] [runnervmf4ws1:67879] *** End of error message ***