PLUMED-NEST

Project ID: plumID:21.008
Source: REM-FEP/replica019/plumed.dat
Originally used with PLUMED version: 2.7
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes

RESTART
Activate restart. More details
The RESTART action with label  calculates something
WHOLEMOLECULES
This action is used to rebuild molecules that can become split by the periodic boundary conditions. More details
 
STRIDE
 the frequency with which molecules are reassembled
=1 
ENTITY0
the atoms that make up a molecule that you wish to align
=1-347




TORSION
Calculate a torsional angle. More details
 
ATOMS
the four atoms involved in the torsional angle
=4,3,84,85    
LABEL
a label for the action so that its output can be referenced in the input to other actions
=T1The TORSION action with label T1 calculates the following quantities:
 Quantity   
 Type   
 Description  
T1
scalar
the TORSION involving these atoms   
TORSION
Calculate a torsional angle. More details
 
ATOMS
the four atoms involved in the torsional angle
=74,73,153,154  
LABEL
a label for the action so that its output can be referenced in the input to other actions
=T2The TORSION action with label T2 calculates the following quantities:
 Quantity   
 Type   
 Description  
T2
scalar
the TORSION involving these atoms
TORSION
Calculate a torsional angle. More details
 
ATOMS
the four atoms involved in the torsional angle
=143,142,222,223 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=T3The TORSION action with label T3 calculates the following quantities:
 Quantity   
 Type   
 Description  
T3
scalar
the TORSION involving these atoms
TORSION
Calculate a torsional angle. More details
 
ATOMS
the four atoms involved in the torsional angle
=212,211,280,293  
LABEL
a label for the action so that its output can be referenced in the input to other actions
=T4The TORSION action with label T4 calculates the following quantities:
 Quantity   
 Type   
 Description  
T4
scalar
the TORSION involving these atoms     


# this the lambda value for current window
lambda1The CONSTANT action with label lambda1 calculates the following quantities:
 Quantity   
 Type   
 Description  
lambda1
scalar
the constant value that was read from the plumed input: 
CONSTANT
Create a constant value that can be passed to actions This action has hidden defaults. More details
 
VALUE
the single number that you would like to store
=0.72
lambda1: 
CONSTANT
Create a constant value that can be passed to actions This action uses the defaults shown here. More details
 
VALUE
the single number that you would like to store
=0.72  
NROWS
 the number of rows in your input matrix
=0 
NCOLS
 the number of columns in your matrix
=0
lambda2The CONSTANT action with label lambda2 calculates the following quantities:
 Quantity   
 Type   
 Description  
lambda2
scalar
the constant value that was read from the plumed input: 
CONSTANT
Create a constant value that can be passed to actions This action has hidden defaults. More details
 
VALUE
the single number that you would like to store
=0.00
lambda2: 
CONSTANT
Create a constant value that can be passed to actions This action uses the defaults shown here. More details
 
VALUE
the single number that you would like to store
=0.00  
NROWS
 the number of rows in your input matrix
=0 
NCOLS
 the number of columns in your matrix
=0



# first we define V0 for T1
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V0_1The MATHEVAL action with label V0_1 calculates the following quantities:
 Quantity   
 Type   
 Description  
V0_1
scalar
an arbitrary function 
ARG
the values input to this function
=T1 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=12.16-0.024*cos(x-pi)-43.32*(cos(x-pi))^2+0.12*(cos(x-pi))^3+38.8*(cos(x-pi))^4-0.0601*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL

# then V1 for T1
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V1_1The MATHEVAL action with label V1_1 calculates the following quantities:
 Quantity   
 Type   
 Description  
V1_1
scalar
an arbitrary function 
ARG
the values input to this function
=T1 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=301.3-0.1478*cos(x-pi)-48.16*(cos(x-pi))^2+0.9948*(cos(x-pi))^3+34.30*(cos(x-pi))^4-1.001*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL


# then V2 for T1
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V2_1The MATHEVAL action with label V2_1 calculates the following quantities:
 Quantity   
 Type   
 Description  
V2_1
scalar
an arbitrary function 
ARG
the values input to this function
=T1 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=348.8-0.1104*cos(x-pi)-54.71*(cos(x-pi))^2+0.7533*(cos(x-pi))^3+35.14*(cos(x-pi))^4-0.8068*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL


# first we define V0 for T2
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V0_2The MATHEVAL action with label V0_2 calculates the following quantities:
 Quantity   
 Type   
 Description  
V0_2
scalar
an arbitrary function 
ARG
the values input to this function
=T2 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=12.16-0.024*cos(x-pi)-43.32*(cos(x-pi))^2+0.12*(cos(x-pi))^3+38.8*(cos(x-pi))^4-0.0601*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL

# then V1 for T2
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V1_2The MATHEVAL action with label V1_2 calculates the following quantities:
 Quantity   
 Type   
 Description  
V1_2
scalar
an arbitrary function 
ARG
the values input to this function
=T2 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=313.9+0.3972*cos(x-pi)-72.12*(cos(x-pi))^2-0.9463*(cos(x-pi))^3+43.87*(cos(x-pi))^4+0.5858*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL


# then V2 for T2
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V2_2The MATHEVAL action with label V2_2 calculates the following quantities:
 Quantity   
 Type   
 Description  
V2_2
scalar
an arbitrary function 
ARG
the values input to this function
=T2 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=351.9-0.7135*cos(x-pi)-69.01*(cos(x-pi))^2+0.653*(cos(x-pi))^3+47.11*(cos(x-pi))^4+0.41*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL



# first we define V0 for T3
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V0_3The MATHEVAL action with label V0_3 calculates the following quantities:
 Quantity   
 Type   
 Description  
V0_3
scalar
an arbitrary function 
ARG
the values input to this function
=T3 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=12.16-0.024*cos(x-pi)-43.32*(cos(x-pi))^2+0.12*(cos(x-pi))^3+38.8*(cos(x-pi))^4-0.0601*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL

# then V1 for T3
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V1_3The MATHEVAL action with label V1_3 calculates the following quantities:
 Quantity   
 Type   
 Description  
V1_3
scalar
an arbitrary function 
ARG
the values input to this function
=T3 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=313.9+0.3972*cos(x-pi)-72.12*(cos(x-pi))^2-0.9463*(cos(x-pi))^3+43.87*(cos(x-pi))^4+0.5858*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL


# then V2 for T3
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V2_3The MATHEVAL action with label V2_3 calculates the following quantities:
 Quantity   
 Type   
 Description  
V2_3
scalar
an arbitrary function 
ARG
the values input to this function
=T3 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=351.9-0.7135*cos(x-pi)-69.01*(cos(x-pi))^2+0.653*(cos(x-pi))^3+47.11*(cos(x-pi))^4+0.41*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL



# first we define V0 for T4



MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V0_4The MATHEVAL action with label V0_4 calculates the following quantities:
 Quantity   
 Type   
 Description  
V0_4
scalar
an arbitrary function 
ARG
the values input to this function
=T4 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=12.16-0.024*cos(x-pi)-43.32*(cos(x-pi))^2+0.12*(cos(x-pi))^3+38.8*(cos(x-pi))^4-0.0601*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL

# then V1 for T4
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V1_4The MATHEVAL action with label V1_4 calculates the following quantities:
 Quantity   
 Type   
 Description  
V1_4
scalar
an arbitrary function 
ARG
the values input to this function
=T4 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=301.3-0.1478*cos(x-pi)-48.16*(cos(x-pi))^2+0.9948*(cos(x-pi))^3+34.30*(cos(x-pi))^4-1.001*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL


# then V2 for T4
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 ...
 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=V2_4The MATHEVAL action with label V2_4 calculates the following quantities:
 Quantity   
 Type   
 Description  
V2_4
scalar
an arbitrary function 
ARG
the values input to this function
=T4 
VAR
the names to give each of the arguments in the function
=x
 
FUNC
the function you wish to evaluate
=348.8-0.1104*cos(x-pi)-54.71*(cos(x-pi))^2+0.7533*(cos(x-pi))^3+35.14*(cos(x-pi))^4-0.8068*(cos(x-pi))^5
 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
... MATHEVAL





# This is Vlambda1 for current window
Vlambda1The MATHEVAL action with label Vlambda1 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambda1
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_1,V1_1,V2_1,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1)*x+l1*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdam1The MATHEVAL action with label Vlambdam1 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdam1
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_1,V1_1,V2_1,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1+0.04)*x+(l1-0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdap1The MATHEVAL action with label Vlambdap1 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdap1
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_1,V1_1,V2_1,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1-0.04)*x+(l1+0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO

Vlbias1The BIASVALUE action with label Vlbias1 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlbias1.bias
scalar
the instantaneous value of the bias potential
Vlbias1.Vlambda1_bias
scalar
one or multiple instances of this quantity can be referenced elsewhere in the input file. these quantities will named with  the arguments of the bias followed by the character string _bias. These quantities tell the user how much the bias is due to each of the colvars. This particular component measures this quantity for the input CV named Vlambda1: 
BIASVALUE
Takes the value of one variable and use it as a bias More details
 
ARG
the labels of the scalar/vector arguments whose values will be used as a bias on the system
=Vlambda1


# This is Vlambda2 for current window
Vlambda2The MATHEVAL action with label Vlambda2 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambda2
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_2,V1_2,V2_2,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1)*x+l1*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdam2The MATHEVAL action with label Vlambdam2 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdam2
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_2,V1_2,V2_2,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1+0.04)*x+(l1-0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdap2The MATHEVAL action with label Vlambdap2 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdap2
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_2,V1_2,V2_2,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1-0.04)*x+(l1+0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO

Vlbias2The BIASVALUE action with label Vlbias2 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlbias2.bias
scalar
the instantaneous value of the bias potential
Vlbias2.Vlambda2_bias
scalar
one or multiple instances of this quantity can be referenced elsewhere in the input file. these quantities will named with  the arguments of the bias followed by the character string _bias. These quantities tell the user how much the bias is due to each of the colvars. This particular component measures this quantity for the input CV named Vlambda2: 
BIASVALUE
Takes the value of one variable and use it as a bias More details
 
ARG
the labels of the scalar/vector arguments whose values will be used as a bias on the system
=Vlambda2


# This is Vlambda3 for current window
Vlambda3The MATHEVAL action with label Vlambda3 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambda3
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_3,V1_3,V2_3,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1)*x+l1*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdam3The MATHEVAL action with label Vlambdam3 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdam3
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_3,V1_3,V2_3,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1+0.04)*x+(l1-0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdap3The MATHEVAL action with label Vlambdap3 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdap3
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_3,V1_3,V2_3,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1-0.04)*x+(l1+0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO

Vlbias3The BIASVALUE action with label Vlbias3 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlbias3.bias
scalar
the instantaneous value of the bias potential
Vlbias3.Vlambda3_bias
scalar
one or multiple instances of this quantity can be referenced elsewhere in the input file. these quantities will named with  the arguments of the bias followed by the character string _bias. These quantities tell the user how much the bias is due to each of the colvars. This particular component measures this quantity for the input CV named Vlambda3: 
BIASVALUE
Takes the value of one variable and use it as a bias More details
 
ARG
the labels of the scalar/vector arguments whose values will be used as a bias on the system
=Vlambda3


# This is Vlambda4 for current window
Vlambda4The MATHEVAL action with label Vlambda4 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambda4
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_4,V1_4,V2_4,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1)*x+l1*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdam4The MATHEVAL action with label Vlambdam4 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdam4
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_4,V1_4,V2_4,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1+0.04)*x+(l1-0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO
Vlambdap4The MATHEVAL action with label Vlambdap4 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlambdap4
scalar
an arbitrary function: 
MATHEVAL
An alias to the CUSTOM function that can also be used to calaculate combinations of variables using a custom expression. More details
 
ARG
the values input to this function
=V0_4,V1_4,V2_4,lambda1,lambda2 
VAR
the names to give each of the arguments in the function
=x,y,z,l1,l2 
FUNC
the function you wish to evaluate
=(1.0-l1-0.04)*x+(l1+0.04)*(1-l2)*y+l2*z 
PERIODIC
if the output of your function is periodic then you should specify the periodicity of the function
=NO

Vlbias4The BIASVALUE action with label Vlbias4 calculates the following quantities:
 Quantity   
 Type   
 Description  
Vlbias4.bias
scalar
the instantaneous value of the bias potential
Vlbias4.Vlambda4_bias
scalar
one or multiple instances of this quantity can be referenced elsewhere in the input file. these quantities will named with  the arguments of the bias followed by the character string _bias. These quantities tell the user how much the bias is due to each of the colvars. This particular component measures this quantity for the input CV named Vlambda4: 
BIASVALUE
Takes the value of one variable and use it as a bias More details
 
ARG
the labels of the scalar/vector arguments whose values will be used as a bias on the system
=Vlambda4




PBMETAD
Used to performed Parallel Bias metadynamics. More details
 ...
ARG
the labels of the scalars on which the bias will act
=T1,T2,T3,T4 
SIGMA
the widths of the Gaussian hills
=0.2,0.2,0.2,0.2  
HEIGHT
the height of the Gaussian hills, one for all biases
=1.2 
PACE
the frequency for hill addition, one for all biases
=500 
BIASFACTOR
use well tempered metadynamics with this bias factor, one for all biases
=40 
LABEL
a label for the action so that its output can be referenced in the input to other actions
=pbThe PBMETAD action with label pb calculates the following quantities:
 Quantity   
 Type   
 Description  
pb.bias
scalar
the instantaneous value of the bias potential
FILE
files in which the lists of added hills are stored, default names are assigned using arguments if FILE is not found
=HILLS_T1,HILLS_T2,HILLS_T3,HILLS_T4
... PBMETAD

PRINT
Print quantities to a file. More details
 
ARG
the labels of the values that you would like to print to the file
=T1,T2,T3,T4,Vlambdam1,Vlambda1,Vlambdap1,Vlambdam2,Vlambda2,Vlambdap2,Vlambdam3,Vlambda3,Vlambdap3,Vlambdam4,Vlambda4,Vlambdap4,pb.bias  
STRIDE
 the frequency with which the quantities of interest should be output
=500 
FILE
the name of the file on which to output these quantities
=COLVAR