Project ID: plumID:21.003
Stderr for source: metainf_input/plumed.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action SAXS with label test2 : cannot understand the following words from the input line : SCALEINT=1680 [runnervm0kj6c:09076] *** Process received signal *** [runnervm0kj6c:09076] Signal: Aborted (6) [runnervm0kj6c:09076] Signal code: (-6) [runnervm0kj6c:09076] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fac9ac45330] [runnervm0kj6c:09076] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fac9ac9eb2c] [runnervm0kj6c:09076] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fac9ac4527e] [runnervm0kj6c:09076] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fac9ac288ff] [runnervm0kj6c:09076] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7fac9b0a5ff5] [runnervm0kj6c:09076] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7fac9b0bb0da] [runnervm0kj6c:09076] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7fac9b0a5a55] [runnervm0kj6c:09076] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7fac9b0a5a6f] [runnervm0kj6c:09076] [ 8] plumed(+0x146dd)[0x55f870b476dd] [runnervm0kj6c:09076] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fac9ac2a1ca] [runnervm0kj6c:09076] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fac9ac2a28b] [runnervm0kj6c:09076] [11] plumed(+0x15365)[0x55f870b48365] [runnervm0kj6c:09076] *** End of error message *** terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action SAXS with label test2 : cannot understand the following words from the input line : SCALEINT=1680 [runnervm0kj6c:09075] *** Process received signal *** [runnervm0kj6c:09075] Signal: Aborted (6) [runnervm0kj6c:09075] Signal code: (-6) [runnervm0kj6c:09075] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f7e12445330] [runnervm0kj6c:09075] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f7e1249eb2c] [runnervm0kj6c:09075] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f7e1244527e] [runnervm0kj6c:09075] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f7e124288ff] [runnervm0kj6c:09075] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7f7e128a5ff5] [runnervm0kj6c:09075] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7f7e128bb0da] [runnervm0kj6c:09075] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7f7e128a5a55] [runnervm0kj6c:09075] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7f7e128a5a6f] [runnervm0kj6c:09075] [ 8] plumed(+0x146dd)[0x55c6060ad6dd] [runnervm0kj6c:09075] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f7e1242a1ca] [runnervm0kj6c:09075] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f7e1242a28b] [runnervm0kj6c:09075] [11] plumed(+0x15365)[0x55c6060ae365] [runnervm0kj6c:09075] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun noticed that process rank 1 with PID 0 on node runnervm0kj6c exited on signal 6 (Aborted). --------------------------------------------------------------------------