Project ID: plumID:21.003
Stderr for source: metainf_input/plumed.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action SAXS with label test2 : cannot understand the following words from the input line : SCALEINT=1680 [runnervm5mmn9:09048] *** Process received signal *** [runnervm5mmn9:09048] Signal: Aborted (6) [runnervm5mmn9:09048] Signal code: (-6) [runnervm5mmn9:09048] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7fd26c045330] [runnervm5mmn9:09048] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7fd26c09eb2c] [runnervm5mmn9:09048] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7fd26c04527e] [runnervm5mmn9:09048] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7fd26c0288ff] [runnervm5mmn9:09048] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7fd26c4a5ff5] [runnervm5mmn9:09048] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7fd26c4bb0da] [runnervm5mmn9:09048] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7fd26c4a5a55] [runnervm5mmn9:09048] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7fd26c4a5a6f] [runnervm5mmn9:09048] [ 8] plumed(+0x146dd)[0x56388667d6dd] [runnervm5mmn9:09048] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7fd26c02a1ca] [runnervm5mmn9:09048] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7fd26c02a28b] [runnervm5mmn9:09048] [11] plumed(+0x15365)[0x56388667e365] [runnervm5mmn9:09048] *** End of error message *** terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:375) void PLMD::Action::error(const std::string&) const ERROR in input to action SAXS with label test2 : cannot understand the following words from the input line : SCALEINT=1680 [runnervm5mmn9:09049] *** Process received signal *** [runnervm5mmn9:09049] Signal: Aborted (6) [runnervm5mmn9:09049] Signal code: (-6) [runnervm5mmn9:09049] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x45330)[0x7f752f845330] [runnervm5mmn9:09049] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x11c)[0x7f752f89eb2c] [runnervm5mmn9:09049] [ 2] /lib/x86_64-linux-gnu/libc.so.6(gsignal+0x1e)[0x7f752f84527e] [runnervm5mmn9:09049] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xdf)[0x7f752f8288ff] [runnervm5mmn9:09049] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5ff5)[0x7f752fca5ff5] [runnervm5mmn9:09049] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xbb0da)[0x7f752fcbb0da] [runnervm5mmn9:09049] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(_ZSt10unexpectedv+0x0)[0x7f752fca5a55] [runnervm5mmn9:09049] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa5a6f)[0x7f752fca5a6f] [runnervm5mmn9:09049] [ 8] plumed(+0x146dd)[0x55b2a96d46dd] [runnervm5mmn9:09049] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x2a1ca)[0x7f752f82a1ca] [runnervm5mmn9:09049] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x8b)[0x7f752f82a28b] [runnervm5mmn9:09049] [11] plumed(+0x15365)[0x55b2a96d5365] [runnervm5mmn9:09049] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun noticed that process rank 0 with PID 0 on node runnervm5mmn9 exited on signal 6 (Aborted). --------------------------------------------------------------------------