Project ID: plumID:20.018
Stderr for source: na/plumed.inp
(download zipped raw stdout)

PairEntropy.cpp: In constructor ‘PLMD::NeighborListParallel::NeighborListParallel(const std::vector<PLMD::AtomNumber>&, const std::vector<PLMD::AtomNumber>&, const bool&, const bool&, const PLMD::Pbc&, PLMD::Communicator&, PLMD::Log&, const double&, const bool&, const int&, const double&)’:
PairEntropy.cpp:65:8: warning: ‘PLMD::NeighborListParallel::mylog’ will be initialized after [-Wreorder]
   Log& mylog;
        ^
PairEntropy.cpp:54:21: warning:   ‘double PLMD::NeighborListParallel::skin_’ [-Wreorder]
   double distance_, skin_;
                     ^
PairEntropy.cpp:180:1: warning:   when initialized here [-Wreorder]
 NeighborListParallel::NeighborListParallel(const vector& list0, const vector& list1,
 ^
PairEntropy.cpp:54:21: warning: ‘PLMD::NeighborListParallel::skin_’ will be initialized after [-Wreorder]
   double distance_, skin_;
                     ^
PairEntropy.cpp:42:8: warning:   ‘bool PLMD::NeighborListParallel::do_full_list_’ [-Wreorder]
   bool do_full_list_;
        ^
PairEntropy.cpp:180:1: warning:   when initialized here [-Wreorder]
 NeighborListParallel::NeighborListParallel(const vector& list0, const vector& list1,
 ^
PairEntropy.cpp: In constructor ‘PLMD::NeighborListParallel::NeighborListParallel(const std::vector<PLMD::AtomNumber>&, const bool&, const PLMD::Pbc&, PLMD::Communicator&, PLMD::Log&, const double&, const bool&, const int&, const double&)’:
PairEntropy.cpp:65:8: warning: ‘PLMD::NeighborListParallel::mylog’ will be initialized after [-Wreorder]
   Log& mylog;
        ^
PairEntropy.cpp:54:21: warning:   ‘double PLMD::NeighborListParallel::skin_’ [-Wreorder]
   double distance_, skin_;
                     ^
PairEntropy.cpp:212:1: warning:   when initialized here [-Wreorder]
 NeighborListParallel::NeighborListParallel(const vector& list0, const bool& do_pbc,
 ^
PairEntropy.cpp:54:21: warning: ‘PLMD::NeighborListParallel::skin_’ will be initialized after [-Wreorder]
   double distance_, skin_;
                     ^
PairEntropy.cpp:42:8: warning:   ‘bool PLMD::NeighborListParallel::do_full_list_’ [-Wreorder]
   bool do_full_list_;
        ^
PairEntropy.cpp:212:1: warning:   when initialized here [-Wreorder]
 NeighborListParallel::NeighborListParallel(const vector& list0, const bool& do_pbc,
 ^
PairEntropy.cpp: In member function ‘void PLMD::NeighborListParallel::updateFullListWithLinkedList(const std::vector<PLMD::VectorGeneric<3u> >&)’:
PairEntropy.cpp:313:47: warning: variable ‘atombin’ set but not used [-Wunused-but-set-variable]
        unsigned atombinx, atombiny, atombinz, atombin;
                                               ^
PairEntropy.cpp:337:47: warning: variable ‘atombin’ set but not used [-Wunused-but-set-variable]
        unsigned atombinx, atombiny, atombinz, atombin;
                                               ^
PairEntropy.cpp: In member function ‘void PLMD::NeighborListParallel::updateHalfListWithLinkedList(const std::vector<PLMD::VectorGeneric<3u> >&)’:
PairEntropy.cpp:377:19: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
              if (j>=i) continue;
                   ^
PairEntropy.cpp:371:47: warning: variable ‘atombin’ set but not used [-Wunused-but-set-variable]
        unsigned atombinx, atombiny, atombinz, atombin;
                                               ^
PairEntropy.cpp:395:47: warning: variable ‘atombin’ set but not used [-Wunused-but-set-variable]
        unsigned atombinx, atombiny, atombinz, atombin;
                                               ^
PairEntropy.cpp: In member function ‘void PLMD::NeighborListParallel::gatherStats(const std::vector<PLMD::VectorGeneric<3u> >&)’:
PairEntropy.cpp:496:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for(unsigned int i=0;i<mycomm.Get_size();i+=1) allNeighNum+=neighbors_ranks_[i];
                         ^
PairEntropy.cpp: In member function ‘virtual void PLMD::colvar::PairEntropy::calculate()’:
PairEntropy.cpp:990:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (minBin > (nhist-1)) minBin=nhist-1;
                       ^
PairEntropy.cpp:992:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (maxBin > (nhist-1)) maxBin=nhist-1;
                       ^
PairEntropy.cpp:1032:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (minBin > (nhist-1)) minBin=nhist-1;
                       ^
PairEntropy.cpp:1034:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (maxBin > (nhist-1)) maxBin=nhist-1;
                       ^
PairEntropy.cpp:1062:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (minBin > (nhist-1)) minBin=nhist-1;
                       ^
PairEntropy.cpp:1064:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
            if (maxBin > (nhist-1)) maxBin=nhist-1;
                       ^
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