PLUMED-NEST

Project ID: plumID:23.003
Source: Case_2/Test_1/1D_lambda_MetaD/rep_1/State_A/plumed_sum_bias.dat
Originally used with PLUMED version: 2.8
Stable: zipped raw stdout - zipped raw stderr - stderr
Master: zipped raw stdout - zipped raw stderr - stderr

Click on the labels of the actions for more information on what each action computes

lambdaThe READ action with label lambda calculates the following quantities:
 Quantity   
 Type   
 Description  
lambda
scalar
the value calculated by this action: READRead quantities from a colvar file. This action has hidden defaults. More details FILEthe name of the file from which to read these quantities=COLVAR_fake VALUESthe values to read from the file=lambda IGNORE_TIME ignore the time in the colvar file IGNORE_FORCES use this flag if the forces added by any bias can be safely ignored
lambda: READRead quantities from a colvar file. This action uses the defaults shown here. More details FILEthe name of the file from which to read these quantities=COLVAR_fake VALUESthe values to read from the file=lambda IGNORE_TIME ignore the time in the colvar file IGNORE_FORCES use this flag if the forces added by any bias can be safely ignored  STRIDE the frequency with which the file should be read=1 EVERY only read every nth line of the colvar file=1

METADUsed to performed metadynamics on one or more collective variables. More details ...
ARGthe labels of the scalars on which the bias will act=lambda 
SIGMAthe widths of the Gaussian hills=0.01     
HEIGHTthe heights of the Gaussian hills=0
PACEthe frequency for hill addition=5000000        
GRID_MINthe lower bounds for the grid=0   
GRID_MAXthe upper bounds for the grid=19   
GRID_BINthe number of bins for the grid=19
TEMPthe system temperature - this is only needed if you are doing well-tempered metadynamics=298
BIASFACTORuse well tempered metadynamics and use this bias factor=60
LABELa label for the action so that its output can be referenced in the input to other actions=metadThe METAD action with label metad calculates the following quantities:
 Quantity   
 Type   
 Description  
metad.bias
scalar
the instantaneous value of the bias potential    
FILE a file in which the list of added hills is stored=HILLS_1D_modified_fake
RESTARTallows per-action setting of restart (YES/NO/AUTO)=YES
... METAD

PRINTPrint quantities to a file. More details STRIDE the frequency with which the quantities of interest should be output=1 ARGthe labels of the values that you would like to print to the file=lambda,metad.bias FILEthe name of the file on which to output these quantities=COLVAR_SUM_BIAS