Project ID: plumID:22.036
Stderr for source: plumed.dat
Download: zipped raw stdout - zipped raw stderr
#! Only the first 1000 rows of the error file are shown below #! To inspect the full error file, please download the zipped raw stderr file above WARNING: using a legacy ActionRegister.h include path, please use <<#include "core/ActionRegister.h">> WARNING: "core/Atoms.h" does not exist anymore in version >=2.10, you should change your code. In file included from /home/runner/opt/include/plumed_master/colvar/../core/../tools/Keywords.h:29, from /home/runner/opt/include/plumed_master/colvar/../core/Action.h:27, from /home/runner/opt/include/plumed_master/colvar/../core/ActionAtomistic.h:25, from /home/runner/opt/include/plumed_master/colvar/../core/Colvar.h:25, from /home/runner/opt/include/plumed_master/colvar/Colvar.h:24, from /home/runner/opt/include/plumed_master/colvar/CoordinationBase.h:24, from ./GHBFIX.5P1p1u.cpp:22: ./GHBFIX.5P1p1u.cpp: In constructor ‘PLMD::colvar::GHBFIX::GHBFIX(const PLMD::ActionOptions&)’: ./GHBFIX.5P1p1u.cpp:139:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 139 | plumed_assert(it<n)<<"itype ="<<it<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed_master/colvar/../core/../tools/Exception.h:373:34: note: in definition of macro ‘plumed_assert’ 373 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ ./GHBFIX.5P1p1u.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 140 | plumed_assert(jt<n)<<"jtype ="<<jt<<", should be smaller than "<<n; | ~~^~ /home/runner/opt/include/plumed_master/colvar/../core/../tools/Exception.h:373:34: note: in definition of macro ‘plumed_assert’ 373 | #define plumed_assert(test) if(!(test)) plumed_error() << PLMD::Exception::Assertion(#test) | ^~~~ terminate called after throwing an instance of 'PLMD::Plumed::ExceptionError' what(): (core/Action.cpp:305) void PLMD::Action::error(const string&) const ERROR in input to action METAD with label metad : The GRID file you want to read: GRID, cannot be found! [fv-az1756-131:05170] *** Process received signal *** [fv-az1756-131:05170] Signal: Aborted (6) [fv-az1756-131:05170] Signal code: (-6) [fv-az1756-131:05170] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x42520)[0x7f0759442520] [fv-az1756-131:05170] [ 1] /lib/x86_64-linux-gnu/libc.so.6(pthread_kill+0x12c)[0x7f07594969fc] [fv-az1756-131:05170] [ 2] /lib/x86_64-linux-gnu/libc.so.6(raise+0x16)[0x7f0759442476] [fv-az1756-131:05170] [ 3] /lib/x86_64-linux-gnu/libc.so.6(abort+0xd3)[0x7f07594287f3] [fv-az1756-131:05170] [ 4] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xa2b9e)[0x7f07598a2b9e] [fv-az1756-131:05170] [ 5] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xae20c)[0x7f07598ae20c] [fv-az1756-131:05170] [ 6] /lib/x86_64-linux-gnu/libstdc++.so.6(+0xae277)[0x7f07598ae277] [fv-az1756-131:05170] [ 7] /lib/x86_64-linux-gnu/libstdc++.so.6(__cxa_rethrow+0x4b)[0x7f07598ae52b] [fv-az1756-131:05170] [ 8] plumed_master(+0x14274)[0x56221291b274] [fv-az1756-131:05170] [ 9] /lib/x86_64-linux-gnu/libc.so.6(+0x29d90)[0x7f0759429d90] [fv-az1756-131:05170] [10] /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0x80)[0x7f0759429e40] [fv-az1756-131:05170] [11] plumed_master(+0x14ed5)[0x56221291bed5] [fv-az1756-131:05170] *** End of error message ***